:S-Nitrosylation
{{short description|Biochemical reaction; attachment of –NO to cysteine in a protein}}
{{DISPLAYTITLE:S-Nitrosylation}}
In biochemistry, S-nitrosylation is the covalent attachment of a nitric oxide group ({{chem2|\sNO}}) to a cysteine thiol within a protein to form an S-nitrosothiol (SNO). S-Nitrosylation has diverse regulatory roles in bacteria, yeast and plants and in all mammalian cells.{{cite journal | vauthors = Anand P, Stamler JS | title = Enzymatic mechanisms regulating protein S-nitrosylation: implications in health and disease | journal = Journal of Molecular Medicine | volume = 90 | issue = 3 | pages = 233–244 | date = March 2012 | pmid = 22361849 | pmc = 3379879 | doi = 10.1007/s00109-012-0878-z }} It thus operates as a fundamental mechanism for cellular signaling across phylogeny and accounts for the large part of NO bioactivity.
S-Nitrosylation is precisely targeted,{{cite journal | vauthors = Sun J, Xin C, Eu JP, Stamler JS, Meissner G | title = Cysteine-3635 is responsible for skeletal muscle ryanodine receptor modulation by NO | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 98 | issue = 20 | pages = 11158–11162 | date = September 2001 | pmid = 11562475 | pmc = 58700 | doi = 10.1073/pnas.201289098 | doi-access = free | bibcode = 2001PNAS...9811158S }} reversible,{{cite journal | vauthors = Padgett CM, Whorton AR | title = S-nitrosoglutathione reversibly inhibits GAPDH by S-nitrosylation | journal = The American Journal of Physiology | volume = 269 | issue = 3 Pt 1 | pages = C739–C749 | date = September 1995 | pmid = 7573405 | doi = 10.1152/ajpcell.1995.269.3.C739 }} spatiotemporally restricted{{cite journal | vauthors = Fang M, Jaffrey SR, Sawa A, Ye K, Luo X, Snyder SH | title = Dexras1: a G protein specifically coupled to neuronal nitric oxide synthase via CAPON | journal = Neuron | volume = 28 | issue = 1 | pages = 183–193 | date = October 2000 | pmid = 11086993 | doi = 10.1016/s0896-6273(00)00095-7 | s2cid = 10533464 | doi-access = free }}{{cite journal | vauthors = Iwakiri Y, Satoh A, Chatterjee S, Toomre DK, Chalouni CM, Fulton D, Groszmann RJ, Shah VH, Sessa WC | display-authors = 6 | title = Nitric oxide synthase generates nitric oxide locally to regulate compartmentalized protein S-nitrosylation and protein trafficking | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 103 | issue = 52 | pages = 19777–19782 | date = December 2006 | pmid = 17170139 | pmc = 1750883 | doi = 10.1073/pnas.0605907103 | doi-access = free | bibcode = 2006PNAS..10319777I }} and necessary for a wide range of cellular responses,{{cite journal | vauthors = Hess DT, Matsumoto A, Kim SO, Marshall HE, Stamler JS | title = Protein S-nitrosylation: purview and parameters | journal = Nature Reviews. Molecular Cell Biology | volume = 6 | issue = 2 | pages = 150–166 | date = February 2005 | pmid = 15688001 | doi = 10.1038/nrm1569 | s2cid = 11676184 }} including the prototypic example of red blood cell mediated autoregulation of blood flow that is essential for vertebrate life.{{cite journal | vauthors = Zhang R, Hess DT, Qian Z, Hausladen A, Fonseca F, Chaube R, Reynolds JD, Stamler JS | display-authors = 6 | title = Hemoglobin βCys93 is essential for cardiovascular function and integrated response to hypoxia | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 112 | issue = 20 | pages = 6425–6430 | date = May 2015 | pmid = 25810253 | pmc = 4443356 | doi = 10.1073/pnas.1502285112 | doi-access = free | bibcode = 2015PNAS..112.6425Z }} Although originally thought to involve multiple chemical routes in vivo, accumulating evidence suggests that S-nitrosylation depends on enzymatic activity, entailing three classes of enzymes (S-nitrosylases) that operate in concert to conjugate NO to proteins, drawing analogy to ubiquitinylation.{{cite journal | vauthors = Seth D, Hess DT, Hausladen A, Wang L, Wang YJ, Stamler JS | title = A Multiplex Enzymatic Machinery for Cellular Protein S-nitrosylation | journal = Molecular Cell | volume = 69 | issue = 3 | pages = 451–464.e6 | date = February 2018 | pmid = 29358078 | pmc = 5999318 | doi = 10.1016/j.molcel.2017.12.025 }} Beside enzymatic activity, hydrophobicity and low pka values also play a key role in regulating the process.S-Nitrosylation was first described by Stamler et al. and proposed as a general mechanism for control of protein function, including examples of both active and allosteric regulation of proteins by endogenous and exogenous sources of NO.{{cite journal | vauthors = Stamler JS, Simon DI, Osborne JA, Mullins ME, Jaraki O, Michel T, Singel DJ, Loscalzo J | display-authors = 6 | title = S-nitrosylation of proteins with nitric oxide: synthesis and characterization of biologically active compounds | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 89 | issue = 1 | pages = 444–448 | date = January 1992 | pmid = 1346070 | pmc = 48254 | doi = 10.1073/pnas.89.1.444 | doi-access = free | bibcode = 1992PNAS...89..444S }}{{cite journal | vauthors = Stamler JS, Simon DI, Jaraki O, Osborne JA, Francis S, Mullins M, Singel D, Loscalzo J | display-authors = 6 | title = S-nitrosylation of tissue-type plasminogen activator confers vasodilatory and antiplatelet properties on the enzyme | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 89 | issue = 17 | pages = 8087–8091 | date = September 1992 | pmid = 1325644 | pmc = 49861 | doi = 10.1073/pnas.89.17.8087 | doi-access = free | bibcode = 1992PNAS...89.8087S }}{{cite book | vauthors = Stamler JS, Simon DI, Osborne JA, Mullins M, Jaraki O, Michel T, Singel D, Loscalzo J | veditors = Moncada S, Marletta MA, Hibbs JB | chapter = Comparison of properties of nitric oxide | title = The biology of nitric oxide: proceedings of the 2nd International Meeting on the Biology of Nitric Oxide, London | publisher = Portland Press | location = London | pages = 20–23 | date = 1992 | oclc = 29356699 }} The redox-based chemical mechanisms for S-nitrosylation in biological systems were also described concomitantly.{{cite journal | vauthors = Stamler JS, Singel DJ, Loscalzo J | title = Biochemistry of nitric oxide and its redox-activated forms | journal = Science | volume = 258 | issue = 5090 | pages = 1898–1902 | date = December 1992 | pmid = 1281928 | doi = 10.1126/science.1281928 | bibcode = 1992Sci...258.1898S }} Important examples of proteins whose activities were subsequently shown to be regulated by S-nitrosylation include the NMDA-type glutamate receptor in the brain.{{cite journal | vauthors = Lei SZ, Pan ZH, Aggarwal SK, Chen HS, Hartman J, Sucher NJ, Lipton SA | title = Effect of nitric oxide production on the redox modulatory site of the NMDA receptor-channel complex | journal = Neuron | volume = 8 | issue = 6 | pages = 1087–1099 | date = June 1992 | pmid = 1376999 | doi = 10.1016/0896-6273(92)90130-6 | s2cid = 24701634 }}{{cite journal | vauthors = Lipton SA, Choi YB, Pan ZH, Lei SZ, Chen HS, Sucher NJ, Loscalzo J, Singel DJ, Stamler JS | display-authors = 6 | title = A redox-based mechanism for the neuroprotective and neurodestructive effects of nitric oxide and related nitroso-compounds | journal = Nature | volume = 364 | issue = 6438 | pages = 626–632 | date = August 1993 | pmid = 8394509 | doi = 10.1038/364626a0 | s2cid = 4355073 | bibcode = 1993Natur.364..626L }} Aberrant S-nitrosylation following stimulation of the NMDA receptor would come to serve as a prototypic example of the involvement of S-nitrosylation in disease.{{cite journal | vauthors = Nakamura T, Prikhodko OA, Pirie E, Nagar S, Akhtar MW, Oh CK, McKercher SR, Ambasudhan R, Okamoto S, Lipton SA | display-authors = 6 | title = Aberrant protein S-nitrosylation contributes to the pathophysiology of neurodegenerative diseases | journal = Neurobiology of Disease | volume = 84 | issue = | pages = 99–108 | date = December 2015 | pmid = 25796565 | pmc = 4575233 | doi = 10.1016/j.nbd.2015.03.017 }} S-Nitrosylation similarly contributes to physiology and dysfunction of cardiac, airway and skeletal muscle and the immune system, reflecting wide-ranging functions in cells and tissues.{{cite journal | vauthors = Stamler JS, Sun QA, Hess DT | title = A SNO storm in skeletal muscle | journal = Cell | volume = 133 | issue = 1 | pages = 33–35 | date = April 2008 | pmid = 18394987 | doi = 10.1016/j.cell.2008.03.013 | s2cid = 15149572 | doi-access = free }}{{cite journal | vauthors = Foster MW, Hess DT, Stamler JS | title = Protein S-nitrosylation in health and disease: a current perspective | journal = Trends in Molecular Medicine | volume = 15 | issue = 9 | pages = 391–404 | date = September 2009 | pmid = 19726230 | pmc = 3106339 | doi = 10.1016/j.molmed.2009.06.007 }}{{cite journal | vauthors = Beuve A, Wu C, Cui C, Liu T, Jain MR, Huang C, Yan L, Kholodovych V, Li H | display-authors = 6 | title = Identification of novel S-nitrosation sites in soluble guanylyl cyclase, the nitric oxide receptor | journal = Journal of Proteomics | volume = 138 | pages = 40–47 | date = April 2016 | pmid = 26917471 | pmc = 5066868 | doi = 10.1016/j.jprot.2016.02.009 }} It is estimated that ~70% of the proteome is subject to S-nitrosylation and the majority of those sites are conserved.{{cite journal | vauthors = Stomberski CT, Hess DT, Stamler JS | title = Protein S-Nitrosylation: Determinants of Specificity and Enzymatic Regulation of S-Nitrosothiol-Based Signaling | journal = Antioxidants & Redox Signaling | volume = 30 | issue = 10 | pages = 1331–1351 | date = April 2019 | pmid = 29130312 | pmc = 6391618 | doi = 10.1089/ars.2017.7403 }} S-Nitrosylation is also known to show up in mediating pathogenicity in Parkinson's disease systems.{{cite journal | vauthors = Sircar E, Rai SR, Wilson MA, Schlossmacher MG, Sengupta R | title = Neurodegeneration: Impact of S-nitrosylated Parkin, DJ-1 and PINK1 on the pathogenesis of Parkinson's disease | journal = Archives of Biochemistry and Biophysics | volume = 704 | pages = 108869 | date = June 2021 | pmid = 33819447 | doi = 10.1016/j.abb.2021.108869 | s2cid = 233036980 }} S-Nitrosylation is thus established as ubiquitous in biology, having been demonstrated to occur in all phylogenetic kingdoms{{cite journal | vauthors = Seth D, Hausladen A, Wang YJ, Stamler JS | title = Endogenous protein S-Nitrosylation in E. coli: regulation by OxyR | journal = Science | volume = 336 | issue = 6080 | pages = 470–473 | date = April 2012 | pmid = 22539721 | pmc = 3837355 | doi = 10.1126/science.1215643 | bibcode = 2012Sci...336..470S }} and has been described as the prototypic redox-based signalling mechanism,{{cite journal | vauthors = Derakhshan B, Hao G, Gross SS | title = Balancing reactivity against selectivity: the evolution of protein S-nitrosylation as an effector of cell signaling by nitric oxide | journal = Cardiovascular Research | volume = 75 | issue = 2 | pages = 210–219 | date = July 2007 | pmid = 17524376 | pmc = 1994943 | doi = 10.1016/j.cardiores.2007.04.023 }}
Denitrosylation
The reverse of S-nitrosylation is denitrosylation, principally an enzymically controlled process. Multiple enzymes have been described to date, which fall into two main classes mediating denitrosylation of protein and low molecular weight SNOs, respectively. S-Nitrosoglutathione reductase (GSNOR) is exemplary of the low molecular weight class; it accelerates the decomposition of S-nitrosoglutathione (GSNO) and of SNO-proteins in equilibrium with GSNO. The enzyme is highly conserved from bacteria to humans.{{cite journal | vauthors = Liu L, Hausladen A, Zeng M, Que L, Heitman J, Stamler JS | title = A metabolic enzyme for S-nitrosothiol conserved from bacteria to humans | journal = Nature | volume = 410 | issue = 6827 | pages = 490–494 | date = March 2001 | pmid = 11260719 | doi = 10.1038/35068596 | bibcode = 2001Natur.410..490L | s2cid = 21280374 }} Thioredoxin (Trx)-related proteins, including Trx1 and 2 in mammals, catalyze the direct denitrosylation of S-nitrosoproteins{{cite journal | vauthors = Stoyanovsky DA, Tyurina YY, Tyurin VA, Anand D, Mandavia DN, Gius D, Ivanova J, Pitt B, Billiar TR, Kagan VE | display-authors = 6 | title = Thioredoxin and lipoic acid catalyze the denitrosation of low molecular weight and protein S-nitrosothiols | journal = Journal of the American Chemical Society | volume = 127 | issue = 45 | pages = 15815–15823 | date = November 2005 | pmid = 16277524 | doi = 10.1021/ja0529135 }}{{cite journal | vauthors = Sengupta R, Ryter SW, Zuckerbraun BS, Tzeng E, Billiar TR, Stoyanovsky DA | title = Thioredoxin catalyzes the denitrosation of low-molecular mass and protein S-nitrosothiols | journal = Biochemistry | volume = 46 | issue = 28 | pages = 8472–8483 | date = July 2007 | pmid = 17580965 | doi = 10.1021/bi700449x }}{{cite journal | vauthors = Benhar M, Forrester MT, Hess DT, Stamler JS | title = Regulated protein denitrosylation by cytosolic and mitochondrial thioredoxins | journal = Science | volume = 320 | issue = 5879 | pages = 1050–1054 | date = May 2008 | pmid = 18497292 | pmc = 2754768 | doi = 10.1126/science.1158265 | bibcode = 2008Sci...320.1050B }} (in addition to their role in transnitrosylation{{cite book | vauthors = Wu C, Liu T, Wang Y, Yan L, Cui C, Beuve A, Li H | title = Nitric Oxide | chapter = Biotin Switch Processing and Mass Spectrometry Analysis of S-Nitrosated Thioredoxin and Its Transnitrosation Targets | series = Methods in Molecular Biology | volume = 1747 | pages = 253–266 | date = 2018 | pmid = 29600465 | pmc = 7136013 | doi = 10.1007/978-1-4939-7695-9_20 | isbn = 978-1-4939-7694-2 }}). Aberrant S-nitrosylation (and denitrosylation) has been implicated in multiple diseases, including heart disease, cancer and asthma{{cite journal | vauthors = Aranda E, López-Pedrera C, De La Haba-Rodriguez JR, Rodriguez-Ariza A | title = Nitric oxide and cancer: the emerging role of S-nitrosylation | journal = Current Molecular Medicine | volume = 12 | issue = 1 | pages = 50–67 | date = January 2012 | pmid = 22082481 | doi = 10.2174/156652412798376099 }}{{cite journal | vauthors = Switzer CH, Glynn SA, Cheng RY, Ridnour LA, Green JE, Ambs S, Wink DA | title = S-nitrosylation of EGFR and Src activates an oncogenic signaling network in human basal-like breast cancer | journal = Molecular Cancer Research | volume = 10 | issue = 9 | pages = 1203–1215 | date = September 2012 | pmid = 22878588 | pmc = 3463231 | doi = 10.1158/1541-7786.MCR-12-0124 }} as well as neurological disorders, including stroke,{{cite journal | vauthors = Gu Z, Kaul M, Yan B, Kridel SJ, Cui J, Strongin A, Smith JW, Liddington RC, Lipton SA | display-authors = 6 | title = S-nitrosylation of matrix metalloproteinases: signaling pathway to neuronal cell death | journal = Science | volume = 297 | issue = 5584 | pages = 1186–1190 | date = August 2002 | pmid = 12183632 | doi = 10.1126/science.1073634 | s2cid = 19797348 | bibcode = 2002Sci...297.1186G }} chronic degenerative diseases (e.g., Parkinson's and Alzheimer's disease){{cite journal | vauthors = Yao D, Gu Z, Nakamura T, Shi ZQ, Ma Y, Gaston B, Palmer LA, Rockenstein EM, Zhang Z, Masliah E, Uehara T, Lipton SA | display-authors = 6 | title = Nitrosative stress linked to sporadic Parkinson's disease: S-nitrosylation of parkin regulates its E3 ubiquitin ligase activity | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 101 | issue = 29 | pages = 10810–10814 | date = July 2004 | pmid = 15252205 | pmc = 490016 | doi = 10.1073/pnas.0404161101 | doi-access = free | bibcode = 2004PNAS..10110810Y }}{{cite journal | vauthors = Uehara T, Nakamura T, Yao D, Shi ZQ, Gu Z, Ma Y, Masliah E, Nomura Y, Lipton SA | display-authors = 6 | title = S-nitrosylated protein-disulphide isomerase links protein misfolding to neurodegeneration | journal = Nature | volume = 441 | issue = 7092 | pages = 513–517 | date = May 2006 | pmid = 16724068 | doi = 10.1038/nature04782 | s2cid = 4423494 | bibcode = 2006Natur.441..513U }}{{cite journal | vauthors = Cho DH, Nakamura T, Fang J, Cieplak P, Godzik A, Gu Z, Lipton SA | title = S-nitrosylation of Drp1 mediates beta-amyloid-related mitochondrial fission and neuronal injury | journal = Science | volume = 324 | issue = 5923 | pages = 102–105 | date = April 2009 | pmid = 19342591 | pmc = 2823371 | doi = 10.1126/science.1171091 | bibcode = 2009Sci...324..102C }} and amyotrophic lateral sclerosis (ALS).{{cite journal | vauthors = Schonhoff CM, Matsuoka M, Tummala H, Johnson MA, Estevéz AG, Wu R, Kamaid A, Ricart KC, Hashimoto Y, Gaston B, Macdonald TL, Xu Z, Mannick JB | display-authors = 6 | title = S-nitrosothiol depletion in amyotrophic lateral sclerosis | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 103 | issue = 7 | pages = 2404–2409 | date = February 2006 | pmid = 16461917 | pmc = 1413693 | doi = 10.1073/pnas.0507243103 | doi-access = free | bibcode = 2006PNAS..103.2404S }}
Transnitrosylation
Another interesting aspect of S-nitrosylation includes the protein protein transnitrosylation, which is the transfer of an NO moiety from a SNO to the free thiols in another protein. Thioredoxin (Txn), a protein disulfide oxidoreductase for the cytosol and caspase 3 are a good example where transnitrosylation is significant in regulating cell death. Another example include, the structural changes in mammalian Hb to SNO-Hb under oxygen depleted conditions helps it to bind to AE1 (Anion Exchange, a membrane protein) and in turn gets transnitrosylated the later.{{cite journal | vauthors = Pawloski JR, Hess DT, Stamler JS | title = Export by red blood cells of nitric oxide bioactivity | journal = Nature | volume = 409 | issue = 6820 | pages = 622–626 | date = February 2001 | pmid = 11214321 | doi = 10.1038/35054560 | bibcode = 2001Natur.409..622P | s2cid = 4387513 }} Cdk5 (a neuronal-specific kinase) is known get nitrosylated at cysteine 83 and 157 in different neurodegenerative diseases like AD. This SNO-Cdk5 in turn is nitrosylated Drp1, the nitrosylated form of which can be considered as a therapeutic target.{{cite journal | vauthors = Nakamura T, Lipton SA | title = Emerging role of protein-protein transnitrosylation in cell signaling pathways | journal = Antioxidants & Redox Signaling | volume = 18 | issue = 3 | pages = 239–249 | date = January 2013 | pmid = 22657837 | doi = 10.1089/ars.2012.4703 | pmc = 3518546 }}
References
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{{DEFAULTSORT:Nitrosylation, S-}}