Acetobacterium

{{Short description|Genus of bacteria}}

{{distinguish|text=the genus Acetobacter}}

{{Italic title}}

{{Taxobox

| color = lightgrey

| name = Acetobacterium

| image_caption = Acetobacterium woodii on the right and is getting fermentated as shown on the left

| image = Fermentation-09-00799-g004A.png

| domain = Bacteria

| phylum = Bacillota

| classis = Clostridia

| ordo = Eubacteriales

| familia = Eubacteriaceae

| genus = Acetobacterium

| genus_authority = Balch et al.{{cite journal | last1 = Balch | first1 = W. E. | last2 = Schoberth | first2 = S. | last3 = Tanner | first3 = R. S. | last4 = Wolfe | first4 = R. S. | title = Acetobacterium, a New Genus of Hydrogen-Oxidizing, Carbon Dioxide-Reducing, Anaerobic Bacteria | journal = International Journal of Systematic Bacteriology | volume = 27 | pages = 355 | year = 1977 | doi = 10.1099/00207713-27-4-355 | issue = 4| doi-access = free }}

| type_species = Acetobacterium woodii

| type_species_authority = Balch et al. 1977

| subdivision_ranks = Species

| subdivision =

  • A. bakii
  • A. carbinolicum
  • "A. dehalogenans"
  • A. fimetarium
  • A. malicum
  • A. paludosum
  • "A. psammolithicum"
  • "A. submarinus"
  • A. tundrae
  • A. wieringae
  • A. woodii

}}

Acetobacterium is a genus of anaerobic, Gram-positive bacteria that belong to the Eubacteriaceae family.

The type species of this genus is Acetobacterium woodii. The name, Acetobacterium, has originated because they are acetogens, predominantly making acetic acid as a byproduct of anaerobic metabolism. Most of the species reported in this genus are homoacetogens, i.e. solely producing acetic acid as their metabolic byproduct. They should not be confused with acetic acid bacteria which are aerobic, Gram-negative Alphaproteobacteria.

Other acetogens use the Wood–Ljungdahl pathway to reduce CO or CO2 and produce acetate, but what distinguishes A.woodii and other Acetobacterium from other acetogens is that it conserves energy by using an Rnf complex to create a sodium gradient rather than a proton gradient. This means that A.woodii would need sodium in its environment in order to make ATP.{{Cite journal|last=Schiel-Bengelsdorf|first=Bettina|last2=Dürre|first2=Peter|date=2012-07-16|title=Pathway engineering and synthetic biology using acetogens|journal=FEBS Letters|language=en|volume=586|issue=15|pages=2191–2198|doi=10.1016/j.febslet.2012.04.043|pmid=22710156|issn=1873-3468|doi-access=free}}

When reducing CO2 to acetate the Acetobacterium uses the Wood–Ljungdahl pathway with CO2 as the electron acceptor. However, the Acetobacterium can use other electron acceptors like caffeate.{{Cite journal|last=Müller|first=Volker|last2=Imkamp|first2=Frank|last3=Biegel|first3=Eva|last4=Schmidt|first4=Silke|last5=Dilling|first5=Sabrina|date=2008-03-01|title=Discovery of a Ferredoxin:NAD+-Oxidoreductase (Rnf) in Acetobacterium woodii|journal=Annals of the New York Academy of Sciences|language=en|volume=1125|issue=1|pages=137–146|doi=10.1196/annals.1419.011|issn=1749-6632}} To use caffeate as an electron acceptor the bacterium couples hydrogen dependent caffeate reduction with electrons from hydrogen and uses sodium ions as coupling ions. The step in the electron transport chain that creates the sodium gradient is the ferredoxin-dependent reduction of NAD+.{{Cite journal|last=Imkamp|first=Frank|last2=Biegel|first2=Eva|last3=Jayamani|first3=Elamparithi|last4=Buckel|first4=Wolfgang|last5=Müller|first5=Volker|date=2007-11-15|title=Dissection of the Caffeate Respiratory Chain in the Acetogen Acetobacterium woodii: Identification of an Rnf-Type NADH Dehydrogenase as a Potential Coupling Site|url= |journal=Journal of Bacteriology|language=en|volume=189|issue=22|pages=8145–8153|doi=10.1128/jb.01017-07|issn=0021-9193|pmid=17873051|pmc=2168664}}

One application of Acetobacterium, is that A. woodii could be used in the transformation of tetrachloromethane to dichloromethane and carbon dioxide by reductive dechlorinations, but the reactions taken to get to the final product are unknown.{{Cite journal|last=Egli|first=C|last2=Tschan|first2=T|last3=Scholtz|first3=R|last4=Cook|first4=A M|last5=Leisinger|first5=T|date=November 1988|title=Transformation of tetrachloromethane to dichloromethane and carbon dioxide by Acetobacterium woodii.|journal=Applied and Environmental Microbiology|volume=54|issue=11|pages=2819–2824|issn=0099-2240|pmid=3145712|pmc=204379}} This reaction is useful because the products, CO2 and dichloromethane are less toxic than tetrachloromethane. Another application of A.woodii is that it can reduce the effects of greenhouse gases since A.woodii can be used to convert CO2 and CO into acetyl-CoA which could then be used to make other chemicals like ethanol and acetate.{{Cite journal|last=Bertsch|first=Johannes|last2=Müller|first2=Volker|date=2015-09-01|title=CO Metabolism in the Acetogen Acetobacterium woodii|url= |journal=Applied and Environmental Microbiology|language=en|volume=81|issue=17|pages=5949–5956|doi=10.1128/aem.01772-15|issn=0099-2240|pmid=26092462|pmc=4551271}} The production of ethanol by Acetobacterium using chemolithotrophic methods is important because ethanol can be used as a biofuel. By using the ethanol that is produced by the bacterium researchers aim to create a sustainable way to create energy.

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN){{cite web | author=J.P. Euzéby | url=https://lpsn.dsmz.de/genus/acetobacterium | title=Acetobacterium | access-date=2022-09-09 | publisher=List of Prokaryotic names with Standing in Nomenclature (LPSN)}} and National Center for Biotechnology Information (NCBI){{cite web |author = Sayers| url=https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=33951&lvl=3&keep=1&srchmode=1&unlock |title=Acetobacterium |access-date=2022-09-09 |publisher=National Center for Biotechnology Information (NCBI) taxonomy database |display-authors=et al.}}

class="wikitable"
colspan=1 | 16S rRNA based LTP_10_2024{{cite web|title=The LTP |url=https://imedea.uib-csic.es/mmg/ltp/#LTP| access-date=10 December 2024}}{{cite web|title=LTP_all tree in newick format| url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree |access-date=10 December 2024}}{{cite web|title=LTP_10_2024 Release Notes| url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf |access-date=10 December 2024}}

! colspan=1 | 120 marker proteins based GTDB 09-RS220{{cite web |title=GTDB release 09-RS220 |url=https://gtdb.ecogenomic.org/about#4%7C |website=Genome Taxonomy Database|access-date=10 May 2024}}{{cite web |title=bac120_r220.sp_labels |url=https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree |website=Genome Taxonomy Database|access-date=10 May 2024}}{{cite web |title=Taxon History |url=https://gtdb.ecogenomic.org/taxon_history/ |website=Genome Taxonomy Database|access-date=10 May 2024}}

style="vertical-align:top|

{{Clade | style=font-size:90%;line-height:80%

|label1=Acetobacterium

|1={{clade

|1={{clade

|1=A. bakii Kotsyurbenko et al. 1997

|2={{clade

|1=A. paludosum Kotsyurbenko et al. 1997

|2=A. tundrae Simankova et al. 2001

}}

}}

|2={{clade

|1=A. carbinolicum Eichler & Schink 1985

|2={{clade

|1={{clade

|1=A. woodii Balch et al. 1977

|2=A. wieringae Braun & Gottschalk 1983

}}

|2={{clade

|1=A. fimetarium Kotsyurbenko et al. 1997

|2=A. malicum Tanaka & Pfennig 1990

}}

}}

}}

}}

}}

|

{{Clade | style=font-size:90%;line-height:80%

|label1=Acetobacterium

|1={{clade

|1=A. bakii

|2={{clade

|1={{clade

|1=A. woodii

|2={{clade

|1="A. dehalogenans" Kaufmann, Wohlfarth &
Diekert 1998
[Acetobacterium malicum]

|2=A. wieringae

}}

}}

|2={{clade

|1=A. fimetarium

|2={{clade

|1=A. paludosum

|2=A. tundrae

}}

}}

}}

}}

}}

See also

References

{{Reflist}}

{{Bacteria classification}}

{{Taxonbar|from=Q3604291}}

Category:Eubacteriaceae

Category:Bacteria genera

{{Clostridia-stub}}