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Agathobacter

{{Short description|Genus of bacteria}}

{{italic title}}

{{Taxobox

| name = Agathobacter

| domain = Bacteria

| phylum = Bacillota

| classis = Clostridia

| ordo = Lachnospirales

| familia = Lachnospiraceae

| genus = Agathobacter

| genus_authority = Rosero et al. 2016

| type_species = Agathobacter rectalis

| type_species_authority = (Hauduroy et al. 1937) Rosero et al. 2016

| subdivision_ranks = Species

| subdivision =

}}

Agathobacter is a bacterial genus from the family of Lachnospiraceae.{{cite journal|title=Agathobacter|website=www.uniprot.org|url=https://www.uniprot.org/taxonomy/1766253|language=en}}{{cite journal|last1=Parker|first1=Charles Thomas|last2=Garrity|first2=George M|editor-first1=Charles Thomas |editor-first2=George M. |editor-last1=Parker |editor-last2=Garrity |title=Nomenclature Abstract for Agathobacter Rosero et al. 2016.|journal=The NamesforLife Abstracts|date=2016 |doi=10.1601/nm.28207|language=en}}{{cite journal|last1=Benada|first1=Oldrˇich|last2=Killer|first2=Jirˇí|last3=Fliegerová|first3=Katerˇina|last4=Mrázek|first4=Jakub|last5=Rosero|first5=Jaime A.|last6=Kopečný|first6=Jan|last7=Sechovcová|first7=Hana|last8=Havlík|first8=Jaroslav|title=Reclassification of Eubacterium rectale (Hauduroy et al. 1937) Prévot 1938 in a new genus Agathobacter gen. nov. as Agathobacter rectalis comb. nov., and description of Agathobacter ruminis sp. nov., isolated from the rumen contents of sheep and cows|journal=International Journal of Systematic and Evolutionary Microbiology|date=1 February 2016|volume=66|issue=2|pages=768–773|doi=10.1099/ijsem.0.000788|pmid=26619944|doi-access=free}}

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN){{cite web | author=A.C. Parte | display-authors= et al.| url=https://lpsn.dsmz.de/genus/agathobacter | title=Agathobacter| access-date=2022-09-09 | publisher=List of Prokaryotic names with Standing in Nomenclature (LPSN)}} and National Center for Biotechnology Information (NCBI){{cite web |author = Sayers| url=https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=1766253&lvl=3&lin=f&keep=1&srchmode=1&unlock |title=Agathobacter |access-date=2022-09-09 |publisher=National Center for Biotechnology Information (NCBI) taxonomy database |display-authors=et al.}}

class="wikitable"
colspan=1 | 16S rRNA based LTP_10_2024{{cite web|title=The LTP |url=https://imedea.uib-csic.es/mmg/ltp/#LTP| access-date=10 December 2024}}{{cite web|title=LTP_all tree in newick format| url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree |access-date=10 December 2024}}{{cite web|title=LTP_10_2024 Release Notes| url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf |access-date=10 December 2024}}

! colspan=1 | 120 marker proteins based GTDB 09-RS220{{cite web |title=GTDB release 09-RS220 |url=https://gtdb.ecogenomic.org/about#4%7C |website=Genome Taxonomy Database|access-date=10 May 2024}}{{cite web |title=bac120_r220.sp_labels |url=https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree |website=Genome Taxonomy Database|access-date=10 May 2024}}{{cite web |title=Taxon History |url=https://gtdb.ecogenomic.org/taxon_history/ |website=Genome Taxonomy Database|access-date=10 May 2024}}

style="vertical-align:top|

{{Clade | style=font-size:90%;line-height:80%

|label1=Agathobacter

|1={{clade

|1=A. rectalis

|2=A. ruminis

}}

}}

|

{{Clade | style=font-size:90%;line-height:80%

|label1=Agathobacter

|1={{clade

|1="A. faecis" (Duncan et al. 2006) Goris, Cuadrat & Braune 2021

|2={{clade

|1=A. rectalis (Hauduroy et al. 1937) Rosero et al. 2016

|2=A. ruminis Rosero et al. 2016

}}

}}

}}

See also

References

{{Reflist}}

{{Bacteria classification}}

{{Taxonbar|from=Q27438818}}

Category:Lachnospiraceae

Category:Bacteria genera

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