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Allobaculum

{{Short description|Genus of bacteria}}

{{italic title}}

{{Taxobox

| name = Allobaculum

| domain = Bacteria

| phylum = Bacillota

| classis = Erysipelotrichia

| ordo = Erysipelotrichales

| familia = Erysipelotrichidae

| genus = Allobaculum

| genus_authority = Greetham et al. 2006

| type_species = Allobaculum stercoricanis

| type_species_authority = Greetham et al. 2006

|subdivision_ranks = Species

|subdivision =

}}

Allobaculum is a Gram-positive, non-spore-forming bacterial, strictly anaerobic and non-motile genus from the family of Erysipelotrichidae, with known species Allobaculum stercoricanis{{cite journal|title=Allobaculum|website=www.uniprot.org|url=https://www.uniprot.org/taxonomy/174708}}{{cite journal|title=Allobaculum|journal=Bergey's Manual of Systematics of Archaea and Bacteria|date=1 January 2015|pages=1–2|doi=10.1002/9781118960608.gbm00759|publisher=John Wiley & Sons, Ltd|isbn=9781118960608|language=en}} and Allobaculum mucolyticum.

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN){{cite web |author=J.P. Euzéby |url=https://lpsn.dsmz.de/genus/allobaculum |title=Allobaculum |access-date=2022-09-09 |publisher=List of Prokaryotic names with Standing in Nomenclature (LPSN)}} and National Center for Biotechnology Information (NCBI).{{cite web |author=Sayers |url=https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=174708&lvl=3&lin=f&keep=1&srchmode=1&unlock |title=Allobaculum |access-date=2022-09-09 |publisher=National Center for Biotechnology Information (NCBI) taxonomy database |display-authors=et al.}}

class="wikitable"
colspan=1 | 16S rRNA based LTP_10_2024{{cite web |title=The LTP |url=https://imedea.uib-csic.es/mmg/ltp/#LTP| access-date=10 December 2024}}{{cite web |title=LTP_all tree in newick format |url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree |access-date=10 December 2024}}{{cite web |title=LTP_10_2024 Release Notes |url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf |access-date=10 December 2024}}

! colspan=1 | 120 marker proteins based GTDB 09-RS220{{cite web |title=GTDB release 09-RS220 |url=https://gtdb.ecogenomic.org/about#4%7C |website=Genome Taxonomy Database |access-date=10 May 2024}}{{cite web |title=bac120_r220.sp_labels |url=https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree |website=Genome Taxonomy Database |access-date=10 May 2024}}{{cite web |title=Taxon History |url=https://gtdb.ecogenomic.org/taxon_history/ |website=Genome Taxonomy Database |access-date=10 May 2024}}

style="vertical-align:top|

{{Clade | style=font-size:90%;line-height:80%

|label1=Allobaculum

|1={{clade

|1=A. stercoricanis Greetham et al. 2006

|2={{clade

|1=A. fili Van Muijlwijk et al. 2023

|2=A. mucolyticum van Muijlwijk et al. 2023

}}

}}

}}

|

{{Clade | style=font-size:90%;line-height:80%

|label1=Allobaculum

|1={{clade

|1=A. stercoricanis

|2={{clade

|1=A. fili

|2=A. mucolyticum

}}

}}

}}

See also

References

{{Reflist}}

Further reading

  • {{cite journal|last1=Greetham|first1=Hazel L.|last2=Gibson|first2=Glen R|last3=Giffard|first3=Catriona|last4=Hippe|first4=Hans|last5=Merkhoffer|first5=Birgit|last6=Steiner|first6=Ulrike|last7=Falsen|first7=Enevold|last8=Collins|first8=Matthew D.|title=Allobaculum stercoricanis gen. nov., sp. nov., isolated from canine feces|journal=Anaerobe|date=1 October 2004|volume=10|issue=5|pages=301–307|doi=10.1016/j.anaerobe.2004.06.004|pmid=16701531}}
  • {{cite journal|last1=van Muijlwijk|first1=G. H.|last2=van Mierlo|first2=G|last3=Jansen|first3=P. W. T. C|last4=Vermeulen|first4=M|last5=Bleumink-Pluym|first5=N. M. C.|last6=Palm|first6=N.W.|last7=van Putten|first7=J.P.M.|last8=de Zoete|first8=M. R|title= Identification of Allobaculum mucolyticum as a novel human intestinal mucin degrader|journal=Gut Microbes|date=30 August 2021|volume=13|issue=1|pages=1966278|doi=10.1080/19490976.2021.1966278|pmid=34455931|pmc=8409761 |hdl=2066/237094|hdl-access=free}}

{{Bacteria classification}}

{{Taxonbar|from=Q3612599}}

Category:Erysipelotrichia

Category:Monotypic bacteria genera

Category:Bacteria genera

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