Anoxygenic photosynthesis#Type I reaction centers

[[File:Anoxygenic Photosynthesis in Green Sulfur Bacteria.svg|thumb|200px|Sulfide is used as a reducing agent during photosynthesis in green and sulfur bacteria. {{olist

|Energy in the form of sunlight

|The light dependent reactions take place when the light excites a reaction center, which donates an electron to another molecule and starts the electron transport chain to produce ATP and NADPH.

|Once NADPH has been produced, the Calvin cycle{{cite book |chapter=§6.6 The Light-independent reactions: Making carbohydrates |title=Biology: Understanding Life |last=Albers |first=Sandra |publisher=Jones & Bartlett |year=2000 |pages=113 |isbn=0-7637-0837-2 |chapter-url=https://books.google.com/books?id=GRDUIbQwGc8C&pg=PA113 }} proceeds as in oxygenic photosynthesis, turning {{CO2}} into glucose.

}}]]During the Archean Era on Earth, the atmosphere lacked or was limited in oxygen, was highly abundant in iron, and had harmful ultraviolet (UV) rays due to a lack of an ozone layer.{{Cite journal |last1=Martin |first1=William F |last2=Bryant |first2=Donald A |last3=Beatty |first3=J Thomas |date=2018-03-01 |title=A physiological perspective on the origin and evolution of photosynthesis |url=https://academic.oup.com/femsre/article/42/2/205/4644831 |journal=FEMS Microbiology Reviews |volume=42 |issue=2 |pages=205–231 |doi=10.1093/femsre/fux056 |pmid=29177446 |pmc=5972617 |issn=0168-6445}} Sedimentary rock records in the ocean have suggested that anoxygenic photosynthesis evolved before oxygenic photosynthesis. One of the lines of evidence that suggests that the bacteria present during the Archean era were anoxygenic is because there was a lack of ferric iron minerals. As ferric minerals were not present, this suggests that oxygenic photosynthesis was not occurring, and oxygen was not being produced (i.e. anoxygenic). Instead of oxygen being the electron donor in the anoxygenic photosynthesis chemical reaction, hydrogen sulfide has been suggested instead.  

Serpentinizing hydrothermal vents have been present on the sea floor for 4.2 billion years, making it a long-standing Earth feature. Serpentinization, an ancient geochemical reaction within this feature, produces hydrogen-based compounds such as H₂ and H₂S. Chemolithoautotrophy where carbon dioxide is reduced to simple organic matter using H₂ as an electron reducer is thought to have been the main process of primary production in this system prior to photosynthesis being developed. This made hydrogen a limiting factor in primary production.

The electron transports chains found within anoxygenic photosynthetic bacteria involve cytochromes (heme) and quinones which are essential for the creation of chlorophyll (Chl). The biosynthesis of Chl is a pivotal step for the evolution of phototrophs. It is likely that the evolution of the critical photopigment developed in hydrothermal conditions where the ultraviolet rays that could be damaging to chlorophototrophs could not penetrate to that depth. The development of Chl helped lead to the development of two types of reaction centers (type I reaction center, RC1 & type II reaction center, RC 2). RC1 has been listed as a precursor to RC2, allowing for the for electrons to flow through ferredoxin, a small iron-sulfur protein, that transfers electrons and is in turn reduced to Fd_red. This process allowed for chlorophototrophs to use H₂S as an electron reducer, allowing for those organisms to move away from the dependency of H₂. However all anoxygenic phototrophs use either RC1 or RC2.

Several groups of bacteria can conduct anoxygenic photosynthesis: green sulfur bacteria (GSB), Chloracidobacterium, heliobacteria, acidobacteriota, red and green filamentous phototrophs (FAPs e.g. Chloroflexia), and purple bacteria.{{cite journal |author1=Donald A. Bryant |author2=Niels-Ulrik Frigaard |date=November 2006 |title=Prokaryotic photosynthesis and phototrophy illuminated |journal=Trends in Microbiology |volume=14 |issue=11 |pages=488–496 |doi=10.1016/j.tim.2006.09.001 |pmid=16997562}}{{cite journal |vauthors=Bryant DA, Costas AM, Maresca JA, Chew AG, Klatt CG, Bateson MM, Tallon LJ, Hostetler J, Nelson WC, Heidelberg JF, Ward DM |date=27 July 2007 |title=Candidatus Chloracidobacterium thermophilum: An Aerobic Phototrophic Acidobacterium |journal=Science |volume=317 |issue=5837 |pages=523–6 |bibcode=2007Sci...317..523B |doi=10.1126/science.1143236 |pmid=17656724 |s2cid=20419870}} Whereas the first four listed use RC1 the following two types of bacteria use RC 2.{{Cite journal |last1=Dong |first1=Shishang |last2=Huang |first2=Guoqiang |last3=Wang |first3=Changhui |last4=Wang |first4=Jiajia |last5=Sui |first5=Sen-Fang |last6=Qin |first6=Xiaochun |date=2022-12-14 |title=Structure of the Acidobacteria homodimeric reaction center bound with cytochrome c |journal=Nature Communications |language=en |volume=13 |issue=1 |pages=7745 |doi=10.1038/s41467-022-35460-6 |pmid=36517472 |pmc=9751088 |issn=2041-1723}} Possibly also some members of Myxococcota, as they have been found to possess a photosynthesis gene cluster encoding a type-II reaction center with all enzymes and proteins required for photosynthesis.{{cite journal | doi=10.1038/s41467-023-42193-7 | title=Globally distributed Myxococcota with photosynthesis gene clusters illuminate the origin and evolution of a potentially chimeric lifestyle | date=2023 | last1=Li | first1=Liuyang | last2=Huang | first2=Danyue | last3=Hu | first3=Yaoxun | last4=Rudling | first4=Nicola M. | last5=Canniffe | first5=Daniel P. | last6=Wang | first6=Fengping | last7=Wang | first7=Yinzhao | journal=Nature Communications | volume=14 | issue=1 | page=6450 | pmid=37833297 | pmc=10576062 | bibcode=2023NatCo..14.6450L }}

Some archaea (e.g. Halobacterium) capture light energy for metabolic function and are thus phototrophic.{{Citation |last=Unden |first=Gottfried |title=Energy Transduction in Anaerobic Prokaryotes |date=2004-01-01 |encyclopedia=Encyclopedia of Biological Chemistry |pages=24–30 |editor-last=Lennarz |editor-first=William J. |url=https://www.sciencedirect.com/science/article/abs/pii/B012443710900020X |access-date=2025-03-14 |place=New York |publisher=Elsevier |isbn=978-0-12-443710-4 |editor2-last=Lane |editor2-first=M. Daniel}} Instead of a chlorophyll-type receptor and electron transport chain, retinal-derived membrane proteins such as microbial rhodopsin are used to capture green light (thus reflecting a purplish color) and use the light energy to drive ion transport against a gradient.{{Citation |last1=Sundarasami |first1=Abhilash |title=Chapter 13 - Halophilic archaea as beacon for exobiology: Recent advances and future challenges |date=2019-01-01 |work=Advances in Biological Science Research |pages=197–214 |editor-last=Meena |editor-first=Surya Nandan |url=https://www.sciencedirect.com/science/article/abs/pii/B9780128174975000136 |access-date=2025-04-12 |publisher=Academic Press |isbn=978-0-12-817497-5 |last2=Sridhar |first2=Akshaya |last3=Mani |first3=Kabilan |editor2-last=Naik |editor2-first=Milind Mohan}} A halophilic archaea, Halobacterium does not grow well in aerobic conditions, instead preferring anoxic conditions, making it a relevant organism to the field of exobiology.

The photopigments used to carry out anaerobic photosynthesis are similar to chlorophyll but differ in molecular detail and peak wavelength of light absorbed.{{Citation |last1=Singh |first1=Amit Kumar |title=Chapter 19 - Analysis of chlorophylls |date=2020-01-01 |work=Recent Advances in Natural Products Analysis |pages=635–650 |editor-last=Sanches Silva |editor-first=Ana |url=https://www.sciencedirect.com/science/article/abs/pii/B9780128164556000196 |access-date=2025-04-11 |publisher=Elsevier |isbn=978-0-12-816455-6 |last2=Rana |first2=Harvesh Kumar |last3=Pandey |first3=Abhay K. |editor2-last=Nabavi |editor2-first=Seyed Fazel |editor3-last=Saeedi |editor3-first=Mina |editor4-last=Nabavi |editor4-first=Seyed Mohammad}}

Bacteriochlorophylls a through g absorb electromagnetic radiation maximally in the near-infrared within their natural membrane milieu. This differs from chlorophyll a, the predominant plant and cyanobacteria pigment, which has peak absorption wavelength approximately 100 nanometers shorter (in the red portion of the visible spectrum). Predominantly found in anaerobic bacteria, they can be a major pigment used for anoxygenic photosynthesis.The quantity of light and the type of light that is absorbed is dependent on 1) the type of organism and 2) where the bacteriochlorophyll is located within the membrane. Generally however, bacteriochlorophyll absorb light at a spectrum between 800 and 1040 nm, for instance, green sulfur bacteria use BChl c through e at a range between 720 and 755 nm.

There are two main types of anaerobic photosynthetic electron transport chains in bacteria.{{Cite book |last1=Blankenship |first1=Robert E. |title=Evolution of Primary Producers in the Sea |last2=Sadekar |first2=Sumedha |last3=Raymond |first3=Jason |publisher=Academic Press |year=2007 |isbn=978-0-12-370518-1 |editor-last=Falkowski |editor-first=Paul G. |pages=21–35 |chapter=CHAPTER 3 - The Evolutionary Transition from Anoxygenic to Oxygenic Photosynthesis |doi=10.1016/B978-012370518-1/50004-7 |editor-last2=Knoll |editor-first2=Andrew H. |chapter-url=https://www.sciencedirect.com/science/article/pii/B9780123705181500047}} The type I reaction centers are found in GSB, Chloracidobacterium, and Heliobacteria, while the RC2 are found in FAPs and purple bacteria.{{Cite journal |last=Niederman |first=Robert A. |date=2024 |title=What We Are Learning from the Diverse Structures of the Homodimeric Type I Reaction Center-Photosystems of Anoxygenic Phototropic Bacteria |journal=Biomolecules |language=en |volume=14 |issue=3 |pages=311 |doi=10.3390/biom14030311 |doi-access=free |pmid=38540731 |issn=2218-273X|pmc=10968294 }}

File:Fpls-02-00028-g012.png |volume=2 |issue=28 |page=28 |doi=10.3389/fpls.2011.00028|doi-access=free |pmid=22645530 |pmc=3355777 }} Licensed under the Creative Commons Attribution 3.0 Unported license. ]]

The electron transport chain of green sulfur bacteria—such as is present in the model organism Chlorobaculum tepidum—uses the reaction center bacteriochlorophyll pair, P800/P840. These photopigment work in tandem with BChl a and a ferredoxin protein to form a bifurcated chain where electrons can be transferred into multiple routes.

Specifically, P800/P840 act as electron donors that are passed to two BChls and two Chl which can act as electron acceptors and the ferredoxin cluster then acts as the terminal electron acceptor. When light is absorbed by the reaction center, P840 enters an excited state with a large negative reduction potential, and so readily donates the electrons to other bacteriochlrophylls and chlorophylls which passes it on down an electron transport chain.{{Cite journal |last1=Sakurai |first1=Hidehiro |last2=Masukawa |first2=Hajime |last3=Kitashima |first3=Masaharu |last4=Inoue |first4=Kazuhito |date=2013-12-01 |title=Photobiological hydrogen production: Bioenergetics and challenges for its practical application |url=https://www.sciencedirect.com/science/article/abs/pii/S138955671300021X |journal=Journal of Photochemistry and Photobiology C: Photochemistry Reviews |volume=17 |pages=1–25 |doi=10.1016/j.jphotochemrev.2013.05.001 |issn=1389-5567|url-access=subscription }} The electron is transferred through a series of electron carriers and complexes until it is used to reduce NAD⁺ to NADH. The separation of the electron via these different routes creates a potential energy difference across the membrane known as a proton gradient which in turn creates ATP, the energy molecule that is essential for essential functions in the cell. P840 regeneration is accomplished with the oxidation of a sulfide ion from hydrogen sulfide (or of hydrogen or ferrous iron) by cytochrome C₅₅₅.{{Cite journal |last1=Azai |first1=Chihiro |last2=Tsukatani |first2=Yusuke |last3=Itoh |first3=Shigeru |last4=Oh-oka |first4=Hirozo |date=2010-06-01 |title=C-type cytochromes in the photosynthetic electron transfer pathways in green sulfur bacteria and heliobacteria |url=https://link.springer.com/article/10.1007/s11120-009-9521-4 |journal=Photosynthesis Research |language=en |volume=104 |issue=2 |pages=189–199 |doi=10.1007/s11120-009-9521-4 |issn=1573-5079|url-access=subscription }}

Although the type II reaction centers are structurally and sequentially analogous to photosystem II (PSII) in plant chloroplasts and cyanobacteria, known organisms that exhibit anoxygenic photosynthesis do not have a region analogous to the oxygen-evolving complex of PSII.

The electron transport chain of purple non-sulfur bacteria begins when the reaction center bacteriochlorophyll pair, P870, becomes excited from the absorption of light. Excited P870 will then donate an electron to bacteriopheophytin, which then passes it on to a series of electron carriers down the electron chain. In the process, it will generate an electrochemical gradient which can then be used to synthesize ATP. Molecular hydrogen in the bacterial environment is the usual electron donor.

• Purple Earth hypothesis

{{Metabolism}}

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Category:Photosynthesis