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Collinsella

{{Short description|Genus of bacteria}}

{{Italic title}}

{{Automatic_taxobox

| taxon = Collinsella

| authority = Kageyama, Benno & Nakase 1999

| type_species = Collinsella aerofaciens

| type_species_authority = (Eggerth 1935) Kageyama, Benno & Nakase 1999

| subdivision_ranks = Species

| subdivision =

See text

}}

Collinsella is a genus of Actinomycetota, in the family Coriobacteriaceae.{{cite journal|last1=Parker|first1=Charles Thomas|last2=Osier|first2=Nicole Danielle|last3=Garrity|first3=George M|editor-first1=Charles Thomas |editor-first2=George M. |editor-last1=Parker |editor-last2=Garrity |title=Nomenclature Abstract for Collinsella Kageyama et al. 1999 emend. Kageyama and Benno 2000.|journal=The NamesforLife Abstracts|date=2009 |doi=10.1601/nm.5745|language=en}} Collinsella is named after the microbiologist Matthew D. Collins.{{cite journal|last1=Kageyama|first1=Akiko|last2=Benno|first2=Yoshimi|title=Collinsella|journal=Bergey's Manual of Systematics of Archaea and Bacteria|date=2015|pages=1–6 |doi=10.1002/9781118960608.gbm00215|publisher=John Wiley & Sons, Ltd|isbn=978-1-118-96060-8 |language=en}}

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN){{cite web |author=A.C. Parte |url=https://lpsn.dsmz.de/genus/collinsella |title=Collinsella |access-date=2025-02-28 |publisher=List of Prokaryotic names with Standing in Nomenclature (LPSN) |display-authors=et al.}} and National Center for Biotechnology Information (NCBI).{{cite web |author=C.L. Schoch |url=https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=102106&lvl=3&lin=f&keep=1&srchmode=1&unlock |title=Collinsella |access-date=2025-02-28 |publisher=National Center for Biotechnology Information (NCBI) taxonomy database |display-authors=et al.}}

class="wikitable"
colspan=1 | 16S rRNA based LTP_10_2024{{cite web |title=The LTP |url=https://imedea.uib-csic.es/mmg/ltp/#LTP| access-date=10 December 2024}}{{cite web |title=LTP_all tree in newick format |url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree |access-date=10 December 2024}}{{cite web |title=LTP_10_2024 Release Notes |url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf |access-date=10 December 2024}}

! colspan=1 | 120 marker proteins based GTDB 09-RS220{{cite web |title=GTDB release 09-RS220 |url=https://gtdb.ecogenomic.org/about#4%7C |website=Genome Taxonomy Database |access-date=10 May 2024}}{{cite web |title=bac120_r220.sp_labels |url=https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree |website=Genome Taxonomy Database |access-date=10 May 2024}}{{cite web |title=Taxon History |url=https://gtdb.ecogenomic.org/taxon_history/ |website=Genome Taxonomy Database |access-date=10 May 2024}}

style="vertical-align:top|

{{Clade | style=font-size:90%;line-height:80%

|label1=Collinsella

|1={{clade

|1=C. tanakaei

|2={{clade

|1={{clade

|1=C. ihumii

|2=C. massiliensis Padmanabhan et al. 2016

}}

|2={{clade

|1=C. aerofaciens

|2={{clade

|1=C. vaginalis

|2={{clade

|1=C. intestinalis

|2=C. stercoris

}}

}}

}}

}}

}}

}}

|

{{Clade | style=font-size:90%;line-height:80%

|label1=Collinsella

|1={{clade

|1={{clade

|1=C. aerofaciens (Eggerth 1935) Kageyama, Benno & Nakase 1999

|2="C. bouchesdurhonensis" Bilen et al. 2017

}}

|2={{clade

|1={{clade

|1="C. phocaeensis" Ndongo et al. 2017

|2={{clade

|1=C. ihumii Ben Khedher et al. 2022

|2="Ca. C. stercoripullorum" Gilroy et al. 2021

}}

}}

|2={{clade

|1={{clade

|1=C. tanakaei Nagai, Watanabe & Morotomi 2010

|2={{clade

|1=C. urealytica corrig. Oh et al. 2024

|2=C. vaginalis Diop et al. 2019

}}

}}

|2={{clade

|1=C. provencensis Dione et al. 2018

|2={{clade

|1=C. intestinalis Kageyama & Benno 2000

|2=C. stercoris Kageyama & Benno 2000

}}

}}

}}

}}

}}

}}

Unassignes species:

  • "C. acetigened" Han et al. 2024
  • "C. avium" Wongkuna et al. 2021

See also

References

{{Reflist}}

{{Portal bar|Biology}}

{{Bacteria classification}}

{{Taxonbar|from=Q5147424}}

Category:Coriobacteriaceae

Category:Bacteria genera

{{actinobacteria-stub}}