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Fabio Rinaldi

{{Short description|Research scientist}}

{{Multiple issues|

{{notability|Academics|date=July 2016}}

{{Orphan|date=September 2023}}

}}

Dr. Fabio Rinaldi is head of NLP research at IDSIA, Switzerland. He earned his PhD in Computational Linguistics from the University of Zurich, Switzerland in 2008. He continued to work at the University of Zurich as a lecturer, senior researcher and group leader until 2020.

Currently, Rinaldi is a group leader at the Swiss Institute of Bioinformatics (SIB),{{cite web|url=https://www.sib.swiss/fabio-rinaldi-group/ |title=Group Page at the SIB}} and a visiting scientist at the Center for Genomic Sciences {{cite web|url=http://www.ccg.unam.mx/en |title=Center for Genomic Sciences, UNAM, Mexico}} (UNAM, Mexico), where he collaborates with the RegulonDB group.

He is the initiator and team leader of the OntoGene research group,{{cite web|url=https://github.com/OntoGene/ |title=OntoGene GitHub page}} which focuses on Text Mining for biomedical applications.

Rinaldi is a very active contributor to the field of biomedical text mining.{{GoogleScholar|aCD4rSEAAAAJ}}{{DBLP|name=Fabio Rinaldi}} He is one of the co-organizers of the well-known BioCreAtIvE{{cite web|url=https://biocreative.bioinformatics.udel.edu/|title=BioCreative web site}} challenges on evaluation of biomedical text mining technologies.

Selected publications

  1. {{cite journal|pmid=18940539 |date=2008 |last1=Rinaldi |first1=F. |title=Laser: A review |journal=Clinics in Dermatology |volume=26 |issue=6 |pages=590–601 |doi=10.1016/j.clindermatol.2007.09.014 |s2cid=19718531 }}
  2. {{cite journal|pmid=22529178 |date=2012 |last1=Rinaldi |first1=F. |last2=Clematide |first2=S. |last3=Garten |first3=Y. |last4=Whirl-Carrillo |first4=M. |last5=Gong |first5=L. |last6=Hebert |first6=J. M. |last7=Sangkuhl |first7=K. |last8=Thorn |first8=C. F. |last9=Klein |first9=T. E. |last10=Altman |first10=R. B. |title=Using ODIN for a PharmGKB revalidation experiment |journal=Database |volume=2012 |pages=bas021 |doi=10.1093/database/bas021 |pmc=3332569 }}
  3. {{cite journal|pmid=22580177 |date=2012 |last1=Rinaldi |first1=F. |last2=Schneider |first2=G. |last3=Clematide |first3=S. |title=Relation mining experiments in the pharmacogenomics domain |journal=Journal of Biomedical Informatics |volume=45 |issue=5 |pages=851–861 |doi=10.1016/j.jbi.2012.04.014 |doi-access=free }}
  4. {{cite journal|pmid=23396322 |date=2013 |last1=Rinaldi |first1=F. |last2=Clematide |first2=S. |last3=Hafner |first3=S. |last4=Schneider |first4=G. |last5=Grigonyte |first5=G. |last6=Romacker |first6=M. |last7=Vachon |first7=T. |title=Using the OntoGene pipeline for the triage task of BioCreative 2012 |journal=Database |volume=2013 |pages=bas053 |doi=10.1093/database/bas053 |pmc=3568389 }}
  5. {{cite journal|pmid=24248279 |date=2013 |last1=Rinaldi |first1=F. |last2=Najafi |first2=B. |title=Temperature measurement in WTE boilers using suction pyrometers |journal=Sensors |volume=13 |issue=11 |pages=15633–15655 |doi=10.3390/s131115633 |pmc=3871099 |bibcode=2013Senso..1315633R |doi-access=free }}
  6. {{cite journal|pmid=27402677 |date=2016 |last1=Rinaldi |first1=F. |last2=Ellendorff |first2=T. R. |last3=Madan |first3=S. |last4=Clematide |first4=S. |last5=Van Der Lek |first5=A. |last6=Mevissen |first6=T. |last7=Fluck |first7=J. |title=BioCreative V track 4: A shared task for the extraction of causal network information using the Biological Expression Language |journal=Database |volume=2016 |pages=baw067 |doi=10.1093/database/baw067 |pmc=4940434 }}
  7. {{cite journal|pmid=29574572 |date=2018 |last1=Sorbellini |first1=E. |last2=Pinto |first2=D. |last3=Marzani |first3=B. |last4=Rinaldi |first4=F. |title=Drug Treatment for Androgenetic Alopecia: First Italian Questionnaire Survey on What Dermatologists Think about Finasteride |journal=Dermatology and Therapy |volume=8 |issue=2 |pages=259–267 |doi=10.1007/s13555-018-0233-6 |pmc=6002321 }}
  8. {{cite journal|pmid=29766701 |date=2018 |last1=Marzani |first1=B. |last2=Pinto |first2=D. |last3=Sorbellini |first3=E. |last4=Rinaldi |first4=F. |title=New multi-targeting strategy in hair growth promotion: In vitro and in vivo studies |journal=Giornale Italiano di Dermatologia e Venereologia |volume=153 |issue=3 |pages=338–343 }}
  9. {{cite journal|pmid=30054800 |date=2018 |last1=De Padova |first1=M. P. |last2=Marzani |first2=B. |last3=Pinto |first3=D. |last4=Rinaldi |first4=F. |title=A Single-Arm, Open-Label, Phase IV Study to Evaluate the Efficacy of a Topical Formulation for Hyperkeratotic Actinic Keratosis Lesions |journal=Dermatology and Therapy |volume=8 |issue=3 |pages=455–462 |doi=10.1007/s13555-018-0252-3 |pmc=6109024 }}
  10. {{cite journal|pmid=30666476 |date=2019 |last1=Furrer |first1=L. |last2=Jancso |first2=A. |last3=Colic |first3=N. |last4=Rinaldi |first4=F. |title=OGER++: Hybrid multi-type entity recognition |journal=Journal of Cheminformatics |volume=11 |issue=1 |page=7 |doi=10.1186/s13321-018-0326-3 |pmc=6689863 |doi-access=free }}
  11. {{cite journal|pmid=32279227 |date=2020 |last1=Rinaldi |first1=F. |last2=Trink |first2=A. |last3=Pinto |first3=D. |title=Efficacy of Postbiotics in a PRP-Like Cosmetic Product for the Treatment of Alopecia Area Celsi: A Randomized Double-Blinded Parallel-Group Study |journal=Dermatology and Therapy |volume=10 |issue=3 |pages=483–493 |doi=10.1007/s13555-020-00369-9 |pmc=7211773 }}
  12. {{cite journal|pmid=33580408 |date=2021 |last1=Rinaldi |first1=F. |last2=Trink |first2=A. |last3=Giuliani |first3=G. |last4=Pinto |first4=D. |title=Italian Survey for the Evaluation of the Effects of Coronavirus Disease 2019 (COVID-19) Pandemic on Alopecia Areata Recurrence |journal=Dermatology and Therapy |volume=11 |issue=2 |pages=339–345 |doi=10.1007/s13555-021-00498-9 |pmc=7880634 }}
  13. {{cite journal|pmid=33610879 |date=2021 |last1=Davoodijam |first1=E. |last2=Ghadiri |first2=N. |last3=Lotfi Shahreza |first3=M. |last4=Rinaldi |first4=F. |title=MultiGBS: A multi-layer graph approach to biomedical summarization |journal=Journal of Biomedical Informatics |volume=116 |doi=10.1016/j.jbi.2021.103706 |s2cid=221340611 |doi-access=free |arxiv=2008.11908 }}
  14. {{cite journal|pmid=34476756 |date=2021 |last1=Babino |first1=G. |last2=Caccavale |first2=S. |last3=Pinto |first3=D. |last4=Trink |first4=A. |last5=Giuliani |first5=G. |last6=Rinaldi |first6=F. |last7=Argenziano |first7=G. |title=A Randomized Double-Blind Parallel-Group Study to Evaluate the Long-Term Effects of a Medical Device Containing 0.3% Octatrienoic Acid in the Treatment of Grade III Actinic Keratosis |journal=Dermatology and Therapy |volume=11 |issue=5 |pages=1751–1762 |doi=10.1007/s13555-021-00594-w |pmc=8484398 }}
  15. {{cite journal|pmid=34481058 |date=2021 |last1=Kanjirangat |first1=V. |last2=Rinaldi |first2=F. |title=Enhancing Biomedical Relation Extraction with Transformer Models using Shortest Dependency Path Features and Triplet Information |journal=Journal of Biomedical Informatics |volume=122 |doi=10.1016/j.jbi.2021.103893 |s2cid=237417517 |doi-access=free }}
  16. {{cite journal|pmid=35045882 |date=2022 |last1=Zanoli |first1=R. |last2=Lavelli |first2=A. |last3=Löffler |first3=T. |last4=Perez Gonzalez |first4=N. A. |last5=Rinaldi |first5=F. |title=An annotated dataset for extracting gene-melanoma relations from scientific literature |journal=Journal of Biomedical Semantics |volume=13 |issue=1 |page=2 |doi=10.1186/s13326-021-00251-3 |pmc=8772125 |doi-access=free }}
  17. {{cite journal|pmid=35061237 |date=2022 |last1=Rinaldi |first1=F. |last2=Marotta |first2=L. |last3=Mascolo |first3=A. |last4=Amoruso |first4=A. |last5=Pane |first5=M. |last6=Giuliani |first6=G. |last7=Pinto |first7=D. |title=Facial Acne: A Randomized, Double-Blind, Placebo-Controlled Study on the Clinical Efficacy of a Symbiotic Dietary Supplement |journal=Dermatology and Therapy |volume=12 |issue=2 |pages=577–589 |doi=10.1007/s13555-021-00664-z |pmc=8850513 }}
  18. {{cite journal|pmid=35331131 |date=2022 |last1=Furrer |first1=L. |last2=Cornelius |first2=J. |last3=Rinaldi |first3=F. |title=Parallel sequence tagging for concept recognition |journal=BMC Bioinformatics |volume=22 |issue=Suppl 1 |page=623 |doi=10.1186/s12859-021-04511-y |pmc=8943923 |doi-access=free }}
  19. {{cite journal|pmid=38147865 |date=2023 |last1=Shaitarova |first1=A. |last2=Zaghir |first2=J.|last3=Lavelli |first3=A.|last4=Krauthammer |first4=M.|last5=Rinaldi |first5=F. |title=Exploring the Latest Highlights in Medical Natural Language Processing across Multiple Languages: A Survey. |journal=Yearbook of Medical Informatics |volume=32 |issue=1 |page=230-243 |doi=10.1055/s-0043-1768726 |pmc=10751112 |doi-access=free }}

Notes

{{Reflist}}

External links

  • [https://nlp.idsia.ch/PEOPLE/fabiorinaldi.html profile at IDSIA]
  • [https://www.cl.uzh.ch/de/about-us/people/alumni/rinaldi.html profile at the University of Zurich] {{Webarchive|url=https://web.archive.org/web/20200815110929/https://www.cl.uzh.ch/de/people/team/compling/rinaldi.html |date=2020-08-15 }}

{{Authority control}}

{{DEFAULTSORT:Rinaldi, Fabio}}

Category:Living people

Category:Year of birth missing (living people)

Category:Place of birth missing (living people)

Category:Academic staff of the University of Zurich

Category:Swiss biologists

Category:Bioinformaticians

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