Generalized gamma distribution

{{Short description|Probability distribution}}

{{Probability distribution

| name = Generalized gamma

| type = density

| pdf_image = File:GenGamma.png

| cdf_image =

| notation =

| parameters = a>0 (scale), d, p > 0

| support = x \;\in\; (0,\, \infty)

| pdf = \frac{p/a^d}{\Gamma(d/p)} x^{d-1}e^{-(x/a)^p}

| cdf = \frac{\gamma(d/p, (x/a)^p)}{\Gamma(d/p)}

| mean = a \frac{\Gamma((d+1)/p)}{\Gamma(d/p)}

| median =

| mode = a \left(\frac{d-1}{p}\right)^{\frac{1}{p}} \mathrm{for}\; d>1, \mathrm{otherwise}\; 0

| variance = a^2\left(\frac{\Gamma((d+2)/p)}{\Gamma(d/p)} - \left(\frac{\Gamma((d+1)/p)}{\Gamma(d/p)}\right)^2\right)

| skewness =

| kurtosis =

| entropy = \ln \frac{a \Gamma(d/p)}{p} + \frac{d}{p} + a\left(\frac{1}{p}-\frac{d}{p}\right)\psi\left(\frac{d}{p}\right)

| mgf =

| cf =

| pgf =

| fisher =

}}

The generalized gamma distribution is a continuous probability distribution with two shape parameters (and a scale parameter). It is a generalization of the gamma distribution which has one shape parameter (and a scale parameter). Since many distributions commonly used for parametric models in survival analysis (such as the exponential distribution, the Weibull distribution and the gamma distribution) are special cases of the generalized gamma, it is sometimes used to determine which parametric model is appropriate for a given set of data.Box-Steffensmeier, Janet M.; Jones, Bradford S. (2004) Event History Modeling: A Guide for Social Scientists. Cambridge University Press. {{ISBN|0-521-54673-7}} (pp. 41-43) Another example is the half-normal distribution.

Characteristics

The generalized gamma distribution has two shape parameters, d > 0 and p > 0, and a scale parameter, a > 0. For non-negative x from a generalized gamma distribution, the probability density function isStacy, E.W. (1962). "A Generalization of the Gamma Distribution." Annals of Mathematical Statistics 33(3): 1187-1192. {{JSTOR|2237889}}

:

f(x; a, d, p) = \frac{(p /a^d) x^{d-1} e^{-(x/a)^p}}{\Gamma(d/p)},

where \Gamma(\cdot) denotes the gamma function.

The cumulative distribution function is

:

F(x; a, d, p) = \frac{\gamma(d/p, (x/a)^p)}{\Gamma(d/p)} , \text{or} \,

P\left( \frac{d}{p}, \left( \frac{x}{a} \right)^p \right) ;

where \gamma(\cdot) denotes the lower incomplete gamma function,

and P(\cdot, \cdot) denotes the regularized lower incomplete gamma function.

The quantile function can be found by noting that F(x; a, d, p) = G((x/a)^p) where G is the cumulative distribution function of the gamma distribution with parameters \alpha = d/p and \beta = 1. The quantile function is then given by inverting F using known relations about inverse of composite functions, yielding:

:

F^{-1}(q; a, d, p) = a \cdot \big[ G^{-1}(q) \big]^{1/p},

with G^{-1}(q) being the quantile function for a gamma distribution with \alpha = d/p,\, \beta = 1.

Related distributions

Alternative parameterisations of this distribution are sometimes used; for example with the substitution α  =   d/p.Johnson, N.L.; Kotz, S; Balakrishnan, N. (1994) Continuous Univariate Distributions, Volume 1, 2nd Edition. Wiley. {{ISBN|0-471-58495-9}} (Section 17.8.7) In addition, a shift parameter can be added, so the domain of x starts at some value other than zero. If the restrictions on the signs of a, d and p are also lifted (but α = d/p remains positive), this gives a distribution called the Amoroso distribution, after the Italian mathematician and economist Luigi Amoroso who described it in 1925.Gavin E. Crooks (2010), [https://threeplusone.com/pubs/on_amoroso.pdf The Amoroso Distribution], Technical Note, Lawrence Berkeley National Laboratory.

Moments

If X has a generalized gamma distribution as above, then

:\operatorname{E}(X^r)= a^r \frac{\Gamma (\frac{d+r}{p})}{\Gamma( \frac{d}{p})} .

Properties

Denote GG(a,d,p) as the generalized gamma distribution of parameters a, d, p.

Then, given c and \alpha two positive real numbers, if f \sim GG(a,d,p), then

c f\sim GG(c a,d,p) and

f^\alpha\sim GG\left(a^\alpha,\frac{d}{\alpha},\frac{p}{\alpha}\right).

Kullback-Leibler divergence

If f_1 and f_2 are the probability density functions of two generalized gamma distributions, then their Kullback-Leibler divergence is given by

:

\begin{align}

D_{KL} (f_1 \parallel f_2)

& = \int_{0}^{\infty} f_1(x; a_1, d_1, p_1) \, \ln \frac{f_1(x; a_1, d_1, p_1)}{f_2(x; a_2, d_2, p_2)} \, dx\\

& = \ln \frac{p_1 \, a_2^{d_2} \, \Gamma\left(d_2 / p_2\right)}{p_2 \, a_1^{d_1} \, \Gamma\left(d_1 /p_1\right)}

+ \left[ \frac{\psi\left( d_1 / p_1 \right)}{p_1} + \ln a_1 \right] (d_1 - d_2)

+ \frac{\Gamma\bigl((d_1+p_2) / p_1 \bigr)}{\Gamma\left(d_1 / p_1\right)} \left( \frac{a_1}{a_2} \right)^{p_2}

- \frac{d_1}{p_1}

\end{align}

where \psi(\cdot) is the digamma function.C. Bauckhage (2014), Computing the Kullback-Leibler Divergence between two Generalized Gamma Distributions, {{arXiv|1401.6853}}.

Software implementation

In the R programming language, there are a few packages that include functions for fitting and generating generalized gamma distributions. The [https://cran.r-project.org/web/packages/gamlss/index.html gamlss] package in R allows for fitting and generating many different distribution families including [https://rdrr.io/cran/gamlss.dist/man/GG.html generalized gamma] (family=GG). Other options in R, implemented in the package flexsurv, include the function dgengamma, with parameterization: \mu=\ln a + \frac{\ln d - \ln p}{p}, \sigma=\frac{1}{\sqrt{pd}}, Q=\sqrt{\frac{p}{d}}, and in the package ggamma with parametrisation: a = a, b = p, k = d/p.

In the python programming language, [https://docs.scipy.org/doc/scipy/tutorial/stats/continuous_gengamma.html it is implemented] in the SciPy package, with parametrisation: c = p, a = d/p, and scale of 1.

See also

References

{{ProbDistributions|continuous-semi-infinite}}

Category:Continuous distributions

Category:Gamma and related functions