Geobacillus
{{Short description|Genus of bacteria}}
{{Italic title}}
{{Automatic taxobox
|taxon = Geobacillus
|authority = Nazina et al. 2001
|image= Geobacillus stearothermophilus NRRL B-1172 (Type Strain).jpg
|image_caption= Geobacillus stearothermophilus on agar plate
| type_species = Geobacillus stearothermophilus
| type_species_authority =(Donk 1920) Nazina et al. 2001
| subdivision_ranks = Species
| subdivision =
See text
}}
Geobacillus is a bacterial genus from the family of Bacillaceae.[https://www.uniprot.org/taxonomy/129337 UniProt]{{cite book|editor1=Paul De Vos |display-editors=etal|title=Bergey's manual of systematic bacteriology.|date=2009|publisher=Springer|location=Dordrecht|isbn=978-0-387-68489-5|edition=2nd}}
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN){{cite web |author=A.C. Parte |url=https://lpsn.dsmz.de/genus/geobacillus |title=Geobacillus |access-date=2025-02-28 |publisher=List of Prokaryotic names with Standing in Nomenclature (LPSN) |display-authors=et al.}} and National Center for Biotechnology Information (NCBI).{{cite web |author=C.L. Schoch |url=https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=129337&lvl=3&lin=f&keep=1&srchmode=1&unlock |title=Geobacillus |access-date=2025-02-28 |publisher=National Center for Biotechnology Information (NCBI) taxonomy database |display-authors=et al.}}
| class="wikitable" |
| colspan=1 | 16S rRNA based LTP_10_2024{{cite web |title=The LTP |url=https://imedea.uib-csic.es/mmg/ltp/#LTP| access-date=10 December 2024}}{{cite web |title=LTP_all tree in newick format |url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree |access-date=10 December 2024}}{{cite web |title=LTP_10_2024 Release Notes |url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf |access-date=10 December 2024}}
! colspan=1 | 120 marker proteins based GTDB 09-RS220{{cite web |title=GTDB release 09-RS220 |url=https://gtdb.ecogenomic.org/about#4%7C |website=Genome Taxonomy Database |access-date=10 May 2024}}{{cite web |title=bac120_r220.sp_labels |url=https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree |website=Genome Taxonomy Database |access-date=10 May 2024}}{{cite web |title=Taxon History |url=https://gtdb.ecogenomic.org/taxon_history/ |website=Genome Taxonomy Database |access-date=10 May 2024}} |
|---|
| style="vertical-align:top|
{{Clade | style=font-size:90%;line-height:80% |label1=Geobacillus |1={{clade |1={{clade |1=G. icigianus Bryanskaya et al. 2015 |2={{clade |1=G. subterraneus Nazina et al. 2001 |2={{clade |1=G. subterraneus aromaticivorans Poli et al. 2013 |2=G. thermodenitrificans (Manachini et al. 2000) Nazina et al. 2001 }} }} }} |2={{clade |1={{clade |1=G. vulcani (Caccamo et al. 2000) Nazina et al. 2004 |2={{clade |1=G. lituanicus Kuisiene, Raugalas & Chitavichius 2004 |2={{clade |1=G. kaustophilus (Priest, Goodfellow & Todd 1989) Nazina et al. 2001 |2=G. thermoleovorans (Zarilla & Perry 1988) Nazina et al. 2001 }} }} }} |2={{clade |1={{clade |1=G. jurassicus Nazina et al. 2005 |2=G.uzenensis Nazina et al. 2001 }} |2={{clade |1=G. proteinophilus Semenova et al. 2019 |2={{clade |1=G. stearothermophilus (Donk 1920) Nazina et al. 2001 |2=G. thermocatenulatus (Golovacheva et al. 1991) Nazina et al. 2001 }} }} }} }} }} }} | {{Clade | style=font-size:90%;line-height:80% |label1=Geobacillus |1={{clade |1={{clade |1=G. subterraneus [incl. G.uzenensis] |2=G. thermodenitrificans }} |2={{clade |1={{clade |2={{clade |1=G. lituanicus |2=Flavobacterium thermophilum Loginova & Egorova 1982 non Yoshida & Oshima 1971 }} }} |2={{clade |1=G. icigianus |2={{clade |2={{clade |1=G. vulcani |2={{clade |1=G. proteinophilus |2={{clade |1=G. thermocatenulatus |2={{clade |1="G. zalihae" Abd Rahman et al. 2007 |2=G. thermoleovorans [incl. G. kaustophilus] }} }} }} }} }} }} }} }} }} |
Unassigned species:
- "G. anatolicus" Uysal et al. 2001 ex Caglayan & Bilgin 2011
- "G. bogazici" Turker et al. 2003
- "G. kaue" Uysal et al. 2001 ex Caglayan & Bilgin 2011
- "G. mahadia" Mohtar et al. 2016
- "G. thermopakistaniensis" Siddiqui et al. 2014
- "G. thermoparaffinivorans" Wang et al. 2005
- "G. tropicalis" Burgos-Figueroa et al. 2006
- "G. uralicus" Popova et al. 2002
See also
References
{{Reflist}}
Further reading
- {{cite journal|last1=Studholme|first1=David J.|title=Some (bacilli) like it hot: genomics of species|journal=Microbial Biotechnology|date=January 2015|volume=8|issue=1|pages=40–48|doi=10.1111/1751-7915.12161|pmid=25195706|pmc=4321371}}
- {{cite book|editor1=Paul De Vos |display-editors=etal|title=Bergey's manual of systematic bacteriology.|date=2009|publisher=Springer|location=Dordrecht|isbn=978-0-387-68489-5|edition=2nd}}
- {{cite book|editor1=Niall A. Logan |editor2=Paul De Vos|title=Endospore-forming Soil Bacteria|date=2011|publisher=Springer|location=Berlin|isbn=978-3-642-19577-8}}
- {{cite book|editor1=Richard H. Baltz |editor2=Julian E. Davies |editor3=Arnold L. Demain |editor4=Alan T. Bull |display-editors=etal|title=Manual of industrial microbiology and biotechnology|date=2010|publisher=ASM Press|location=Washington, DC|isbn=978-1-55581-512-7|edition=3rd}}
- {{cite book|editor1=T. Satyanarayana |editor2=Bhavdish Narain Johri |editor3=Anil Prakash|title=Microorganisms in sustainable agriculture and biotechnology|date=2012|publisher=Springer|location=Dordrecht|isbn=978-94-007-2214-9|edition=2012.}}
{{Portal bar|Biology}}
{{Bacteria classification}}
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