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Halopiger

{{Short description|Genus of archaea}}

{{Automatic taxobox

| taxon = Halopiger

| authority = Gutiérrez et al., 2007

| type_species = Halopiger xanaduensis

| type_species_authority = Gutérrez et al. 2007

| subdivision_ranks = Species

| subdivision =

}}

Halopiger is a genus of archaeans in the family Natrialbaceae that have high tolerance to salinity.

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN){{cite web|author=J.P. Euzéby |url=https://lpsn.dsmz.de/genus/halopiger |title=Halopiger |access-date=2021-11-17 |publisher=List of Prokaryotic names with Standing in Nomenclature (LPSN)}} and National Center for Biotechnology Information (NCBI).{{cite web |author = Sayers |display-authors=et al.| url=https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=387342&lvl=3&keep=1&srchmode=1&unlock |title=Halopiger |access-date=2022-06-05 |publisher=National Center for Biotechnology Information (NCBI) taxonomy database}}

class="wikitable"
colspan=1 | 16S rRNA based LTP_10_2024{{cite web|title=The LTP |url=https://imedea.uib-csic.es/mmg/ltp/#LTP| access-date=10 December 2024}}{{cite web|title=LTP_all tree in newick format| url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree |access-date=10 December 2024}}{{cite web|title=LTP_10_2024 Release Notes| url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf |access-date=10 December 2024}}

! colspan=1 | 53 marker proteins based GTDB 09-RS220{{cite web |title=GTDB release 09-RS220 |url=https://gtdb.ecogenomic.org/about#4%7C |website=Genome Taxonomy Database|access-date=10 May 2024}}{{cite web |title=ar53_r220.sp_label |url=https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/ar53_r220.sp_labels.tree |website=Genome Taxonomy Database|access-date=10 May 2024}}{{cite web |title=Taxon History |url=https://gtdb.ecogenomic.org/taxon_history/ |website=Genome Taxonomy Database|access-date=10 May 2024}}

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{{Clade|style=font-size:90%; line-height:90%

|label1=Halopiger

|1={{clade

|1=H. djelfimassiliensis Hassani et al. 2016

|2={{clade

|1=H. salifodinae Zhang et al. 2013

|2={{clade

|1=H. goleimassiliensis Hassani et al. 2016

|2={{clade

|1=H. xanaduensis Gutierrez et al. 2007{{cite journal | last1 = Gutierrez | first1 = M. C. | last2 = Castillo | first2 = A. M. | last3 = Kamekura | first3 = M. | last4 = Xue | first4 = Y. | last5 = Ma | first5 = Y. | last6 = Cowan | first6 = D. A. | last7 = Jones | first7 = B. E. | last8 = Grant | first8 = W. D. | last9 = Ventosa | first9 = A. | title = Halopiger xanaduensis gen. nov., sp. nov., an extremely halophilic archaeon isolated from saline Lake Shangmatala in Inner Mongolia, China | journal = International Journal of Systematic and Evolutionary Microbiology | volume = 57 | issue = 7 | year = 2007 | pages = 1402–1407 | issn = 1466-5026 | doi=10.1099/ijs.0.65001-0 | pmid=17625165| doi-access = free }}

|2={{clade

|1=H. aswanensis Hezayen et al. 2010{{cite journal | last1 = Hezayen | first1 = F. F. | last2 = Gutierrez | first2 = M. C. | last3 = Steinbüchel | first3 = A. | last4=Tindall | first4=B. J. | last5 = Rehm | first5 = B. H. A. | title = Halopiger aswanensis sp. nov., a polymer-producing and extremely halophilic archaeon isolated from hypersaline soil | journal = International Journal of Systematic and Evolutionary Microbiology | volume = 60 | issue = 3 | year = 2009 | pages = 633–637 | issn = 1466-5026 | doi=10.1099/ijs.0.013078-0 | pmid=19654343| doi-access = free }}

|2=H. thermotolerans Minegishi et al. 2016{{cite journal | last1 = Minegishi | first1 = Hiroaki | last2 = Shimogaki | first2 = Ryuta | last3 = Enomoto | first3 = Shigeaki | last4 = Echigo | first4 = Akinobu | last5 = Kondo | first5 = Yusuke | last6 = Nagaoka | first6 = Shuhei | last7 = Shimane | first7 = Yasuhiro | last8 = Kamekura | first8 = Masahiro | last9 = Itoh | first9 = Takashi | last10 = Ohkuma | first10 = Moriya | last11 = Nunoura | first11 = Takuro | last12 = Takai | first12 = Ken | last13 = Usami | first13 = Ron | title = Halopiger thermotolerans sp. nov., a thermo-tolerant haloarchaeon isolated from commercial salt | journal = International Journal of Systematic and Evolutionary Microbiology | volume = 66 | issue = 12 | year = 2016 | pages = 4975–4980 | issn = 1466-5026 | doi = 10.1099/ijsem.0.001455| pmid = 27562780 | doi-access = free }}

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{{Clade|style=font-size:90%; line-height:90%

|1={{clade

|1={{clade

|label1=Halopiger

|1={{clade

|1=H. aswanensis

|2=H. xanaduensis

}}

}}

|2={{clade

|1=Halopiger djelfimassiliensis

|2={{clade

|1=Natronobacterium

|2=Halobiforma

}}

}}

}}

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Species formerly placed in this taxon

  • Halopiger salifodinae,{{cite journal | last1 = Zhang | first1 = W.-Y. | last2 = Meng | first2 = Y. | last3 = Zhu | first3 = X.-F. | last4 = Wu | first4 = M. | title = Halopiger salifodinae sp. nov., an extremely halophilic archaeon isolated from a salt mine | journal = International Journal of Systematic and Evolutionary Microbiology | volume = 63 | issue = Pt 10 | year = 2013 | pages = 3563–3567 | issn = 1466-5026 | doi = 10.1099/ijs.0.050971-0| pmid = 23563233 }} now Natrinema salifodinae

See also

References

{{Reflist}}

Further reading

=Scientific journals=

  • {{cite journal |last1=Ikram|first1=HI|last2=Catherine|first2=R|last3=Caroline|first3=M|last4=Didier|first4=R|last5=Hocine|first5=H|last6=Christelle|first6=D|title=Non-contiguous finished genome sequence and description of Halopiger goleamassiliensis sp. nov.|journal=Standards in Genomic Sciences|date=15 June 2014|volume=9|issue=3|pages=956–9|doi=10.4056/sigs.4618288|pmid=25197441|pmc=4149028}}
  • {{ cite journal |vauthors=Gutiérrez MC, Castillo AM, Kamekura M, Xue Y, Ma Y, Cowan DA, Jones BE, Grant WD, Ventosa A | date = 2007 | title = Halopiger xanaduensis gen. nov., sp., an extremely halophilic archaeon isolated from saline Lake Shangmatala in Inner Mongolia, China | journal = Int. J. Syst. Evol. Microbiol. | volume = 57 | pages = 1402–1407 | pmid = 17625165 | doi = 10.1099/ijs.0.65001-0 | issue = Pt 7| doi-access = free }}
  • {{cite journal |author1=Hezayen, F.F. |author2=Gutiérrez, M.C. |author3=Steinbüchel, A. |author4=Tindall, B.J. |author5=Rehm, B.H.A. |date=2010|title=Halopiger aswanensis sp. nov., a polymer-producing and extremely halophilic archaeon isolated from hypersaline soil|journal=Int. J. Syst. Evol. Microbiol.|volume=60|issue=3|pages=633–637 |doi=10.1099/ijs.0.013078-0 |pmid=19654343|url=http://ijs.microbiologyresearch.org/deliver/fulltext/ijsem/60/3/633.pdf?itemId=/content/journal/ijsem/10.1099/ijs.0.013078-0&mimeType=pdf&isFastTrackArticle=|doi-access=free}}

{{Taxonbar|from=Q5643438}}

Category:Archaea genera

Category:Halobacteria

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