Methanococcoides

{{Short description|Genus of archaea}}

{{Automatic taxobox

| taxon = Methanococcoides

| authority = Sowers and Ferry 1985

| type_species = Methanococcoides methylutens

| type_species_authority = Sowers and Ferry 1985

| subdivision_ranks = Species

| subdivision =

}}

Methanococcoides is a genus of archaeans in the family Methanosarcinaceae.

Methanococcoides species are methanogens entirely dependent on methylated compounds for nutrition. The type species of Methanococcoides is Methanococcoides methylutens.{{cite journal|author1= Yue Guan|author2=David K. Ngugi|author3=Jochen Blom|author4=Shahjahan Ali|author5=James G. Ferry|author6=Ulrich Stingl|title=Draft Genome Sequence of an Obligately Methylotrophic Methanogen, Methanococcoides methylutens, Isolated from Marine Sediment|journal=Genome Announcements|pmc=4239356|doi=10.1128/genomeA.01184-14|date=20 November 2014|volume=2|issue=6|pages=e01184-14|pmid=25414501}}

{{cite book

|author=D.R. Boone |display-authors=etal

|date=2001

|title=Order III: methanosarcinales

|editor="Bergey's Manual of Systematic Bacteriology"

|edition=vol. 1, 2nd

|location=New York

|publisher=Springer

}}

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN){{cite web|author=J.P. Euzéby |url=https://lpsn.dsmz.de/genus/methanococcoides |title=Methanococcoides |access-date=2021-11-17 |publisher=List of Prokaryotic names with Standing in Nomenclature (LPSN)}} and National Center for Biotechnology Information (NCBI).{{cite web |author = Sayers|display-authors = et al.| url=https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=2225&lvl=3&keep=1&srchmode=1&unlock |title=Methanococcoides |access-date=2022-06-05 |publisher=National Center for Biotechnology Information (NCBI) taxonomy database}}

class="wikitable"
colspan=1 | 16S rRNA based LTP_06_2022{{cite web|title=The LTP |url=https://imedea.uib-csic.es/mmg/ltp/#LTP| access-date=10 May 2023}}{{cite web|title=LTP_all tree in newick format| url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_06_2022.ntree |access-date=10 May 2023}}{{cite web|title=LTP_06_2022 Release Notes| url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_06_2022_release_notes.pdf |access-date=10 May 2023}}

! colspan=1 | 53 marker proteins based GTDB 09-RS220{{cite web |title=GTDB release 09-RS220 |url=https://gtdb.ecogenomic.org/about#4%7C |website=Genome Taxonomy Database|access-date=10 May 2024}}{{cite web |title=ar53_r220.sp_label |url=https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/ar53_r220.sp_labels.tree |website=Genome Taxonomy Database|access-date=10 May 2024}}{{cite web |title=Taxon History |url=https://gtdb.ecogenomic.org/taxon_history/ |website=Genome Taxonomy Database|access-date=10 May 2024}}

style="vertical-align:top|

{{Clade|style=font-size:90%; line-height:90%

|label1=Methanococcoides

|1={{clade

|1={{clade

|1=M. alaskense

|2=M. burtonii

}}

|2={{clade

|1=M. methylutens

|2=M. orientis

}}

}}

}}

|

{{Clade|style=font-size:90%; line-height:90%

|label1=Methanococcoides

|1={{clade

|1={{clade

|1=M. burtonii Franzmann et al. 1993

|2={{clade

|1=M. alaskense Singh et al. 2005

|2="M. seepicolus" Li et al. 2021

}}

}}

|2={{clade

|1=M. vulcani L'Haridon et al. 2014

|2={{clade

|1=M. methylutens Sowers & Ferry 1985

|2=M. orientis Liang et al. 2022

}}

}}

}}

}}

See also

References

{{Reflist}}

Further reading

  • {{cite journal | author = Springer E |author2=Sachs MS |author3=Woese CR |author4=Boone DR | date = 1995 | title = Partial gene sequences for the A subunit of methyl-coenzyme M reductase (mcrI) as a phylogenetic tool for the family Methanosarcinaceae | journal = Int. J. Syst. Bacteriol. | volume = 45 | pages = 554–559 | pmid = 8590683 | doi = 10.1099/00207713-45-3-554 | issue = 3| doi-access = free }}
  • {{cite journal | author = Sowers KR |author2=Johnson JL |author3=Ferry JG | date = 1984 | title = Phylogenic relationships among the methylotrophic methane-producing bacteria and emendation of the family Methanosarcinaceae | journal = Int. J. Syst. Bacteriol. | volume = 34 |issue=4 | pages = 444–450 | doi = 10.1099/00207713-34-4-444 | doi-access = free }}
  • {{cite journal | author = Sowers KR |author2=Ferry JG | date = 1983 | title = Isolation and characterization of a methylotrophic marine methanogen, Methanococcoides methylutens gen. nov., sp. nov | journal = Appl. Environ. Microbiol. | volume = 45 | pages = 684–690 | pmid=16346215 | issue=2 |doi=10.1128/AEM.45.2.684-690.1983 | pmc=242344|bibcode=1983ApEnM..45..684S }}
  • {{cite journal | author = Balch WE |author2=Fox GE |author3=Magrum LJ |author4=Woses CR |display-authors=4 |author5=Wolfe RS | date = 1979 | title = Methanogens: reevaluation of a unique biological group | journal = Microbiol. Rev. | volume = 43 | pages = 260–296 | pmid = 390357 | issue = 2 | pmc = 281474 | doi = 10.1128/MMBR.43.2.260-296.1979}}

{{Taxonbar|from=Q4044109}}

Category:Archaea genera

Category:Euryarchaeota

{{Euryarchaeota-stub}}