NicO transporters
{{Short description|Member of the Lysine Exporter (LysE) Superfamily}}
The Nickel/Cobalt Transporter (NicO) Family is a member of the Lysine Exporter (LysE) Superfamily.{{Cite journal|last1=Tsu|first1=Brian V.|last2=Saier|first2=Milton H.|date=2015-01-01|title=The LysE Superfamily of Transport Proteins Involved in Cell Physiology and Pathogenesis|journal=PLOS ONE|volume=10|issue=10|pages=e0137184|doi=10.1371/journal.pone.0137184|issn=1932-6203|pmc=4608589|pmid=26474485|bibcode=2015PLoSO..1037184T|doi-access=free}}
Homology
Homologues of the NicO family have differing predicted topologies: 6, 7 and 8 TMSs. One such homologue, RcnA (YohM; [http://www.tcdb.org/search/result.php?tc=2.A.113.1.1 TC# 2.A.113.1.1]) of E. coli (274 aas) has 6 putative transmembrane segments (TMSs) in a 3 + 3 arrangement with a large hydrophilic loop between putativeTMSs 3 and 4. Several homologues of RcnA (e.g., RcnA homologue from Ralstonia solanacearum; [http://www.tcdb.org/search/result.php?tc=2.A.113.1.3 TC# 2.A.113.1.3]; CAD17703) have 7 putative TMSs (4 + 3). Still another homologue, UreH of Methanocaldococcus janaschii ([http://www.tcdb.org/search/result.php?tc=2.A.113.1.4 TC# 2.A.113.1.4]) has 6 putative TMSs in a more characteristic 3 + 3 TMS arrangement. The NicO family within the LysE superfamily may have a common origin with the TOG superfamily, having lost TMSs 1 and 4 in the 8 TMS TOG superfamily topology.{{Cite web|title=The Nickel/cobalt Transporter (NicO) Family|url=http://www.tcdb.org/search/result.php?tc=2.A.113|access-date=2016-02-29|website=Transporter Classification Database}}
Function
This protein is believed to catalyze Co2+ and Ni2+ efflux.{{Cite journal
| last1 = Rodrigue
| first1 = Agnès
| last2 = Effantin
| first2 = Géraldine
| last3 = Mandrand-Berthelot
| first3 = Marie-Andrée
| date = 2005-04-15
| title = Identification of rcnA (yohM), a Nickel and Cobalt Resistance Gene in Escherichia coli
| journal = Journal of Bacteriology
| language = en
| volume = 187
| issue = 8
| pages = 2912–2916
| doi = 10.1128/JB.187.8.2912-2916.2005
| issn = 0021-9193
| pmc = 1070376
| pmid = 15805538
}}
The overall reaction catalyzed by proteins of the NicO family is probably:
[Ni2+ or Co2+] (in) → [Ni2+ or Co2+] (out).
See also
- NiCoT family, family of nickel/cobalt transporters within the TOG superfamily
- Nickel
- Cobalt
- Transporter Classification Database
- Transport protein
Further reading
- Iwig, Jeffrey S.; Rowe, Jessica L.; Chivers, Peter T. (2006-10-01). [http://onlinelibrary.wiley.com/doi/10.1111/j.1365-2958.2006.05369.x/abstract "Nickel homeostasis in Escherichia coli – the rcnR-rcnA efflux pathway and its linkage to NikR function"]. Molecular Microbiology 62 (1): 252–262.doi:10.1111/j.1365-2958.2006.05369.x. ISSN [https://www.worldcat.org/issn/1365-2958 1365-2958].
- Marrero, Jeannette; Auling, Georg; Coto, Orquidea; Nies, Dietrich H. (2007-01-01). [https://www.ncbi.nlm.nih.gov/pubmed/17186148 "High-level resistance to cobalt and nickel but probably no transenvelope efflux: Metal resistance in the Cuban Serratia marcescens strain C-1"]. Microbial Ecology 53 (1): 123–133. doi:10.1007/s00248-006-9152-7. ISSN [https://www.worldcat.org/issn/0095-3628 0095-3628]. PMID [https://www.ncbi.nlm.nih.gov/pubmed/17186148 17186148].
- Protchenko, Olga; Rodriguez-Suarez, Roberto; Androphy, Rachel; Bussey, Howard; Philpott, Caroline C. (2006-07-28). [https://www.ncbi.nlm.nih.gov/pubmed/16717099 "A screen for genes of heme uptake identifies the FLC family required for import of FAD into the endoplasmic reticulum"]. The Journal of Biological Chemistry 281 (30): 21445–21457.doi:10.1074/jbc.M512812200. ISSN [https://www.worldcat.org/issn/0021-9258 0021-9258].PMID [https://www.ncbi.nlm.nih.gov/pubmed/16717099 16717099].
References
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External links
- [http://www.tcdb.org/search/result.php?tc=2.A.113 The Nickel/Cobalt Transporter Family] Transporter Classification Database
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Category:Transmembrane proteins
Category:Transmembrane transporters
Category:Integral membrane proteins
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