PCDH1

{{Short description|Protein-coding gene in the species Homo sapiens}}

{{Infobox_gene}}

Protocadherin-1 is a protein that in humans is encoded by the PCDH1 gene.{{cite journal |vauthors=Sano K, Tanihara H, Heimark RL, Obata S, Davidson M, St John T, Taketani S, Suzuki S | title = Protocadherins: a large family of cadherin-related molecules in central nervous system | journal = EMBO J | volume = 12 | issue = 6 | pages = 2249–56 |date=Jul 1993 | pmid = 8508762 | pmc = 413453 | doi = 10.1002/j.1460-2075.1993.tb05878.x}}{{cite web | title = Entrez Gene: PCDH1 protocadherin 1| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=5097}}

This gene belongs to the protocadherin subfamily within the cadherin superfamily. The encoded protein is a membrane protein found at cell-cell boundaries. It is involved in neural cell adhesion, suggesting a possible role in neuronal development. The protein includes an extracellular region, containing 7 cadherin-like domains, a transmembrane region and a C-terminal cytoplasmic region. Cells expressing the protein showed cell aggregation activity. Alternative splicing occurs in this gene.

References

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Further reading

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  • {{cite journal |vauthors=Yagi T, Takeichi M |title=Cadherin superfamily genes: functions, genomic organization, and neurologic diversity |journal=Genes Dev. |volume=14 |issue= 10 |pages= 1169–80 |year= 2000 |pmid= 10817752 |doi= 10.1101/gad.14.10.1169|s2cid=44844497 |doi-access=free }}
  • {{cite journal |vauthors=Nollet F, Kools P, van Roy F |title=Phylogenetic analysis of the cadherin superfamily allows identification of six major subfamilies besides several solitary members |journal=J. Mol. Biol. |volume=299 |issue= 3 |pages= 551–72 |year= 2000 |pmid= 10835267 |doi= 10.1006/jmbi.2000.3777 }}
  • {{cite journal |vauthors=Bonaldo MF, Lennon G, Soares MB |title=Normalization and subtraction: two approaches to facilitate gene discovery |journal=Genome Res. |volume=6 |issue= 9 |pages= 791–806 |year= 1997 |pmid= 8889548 |doi=10.1101/gr.6.9.791 |doi-access=free }}
  • {{cite journal | author=Del Mastro RG |title=Human chromosome-specific cDNA libraries: new tools for gene identification and genome annotation |journal=Genome Res. |volume=5 |issue= 2 |pages= 185–94 |year= 1997 |pmid= 9132272 |doi=10.1101/gr.5.2.185 |name-list-style=vanc| author2=Wang L | author3=Simmons AD | display-authors=3 | last4=Gallardo | first4=T D | last5=Clines | first5=G A | last6=Ashley | first6=J A | last7=Hilliard | first7=C J | last8=Wasmuth | first8=J J | last9=McPherson | first9=J D | doi-access=free }}
  • {{cite journal |vauthors=Wu Q, Maniatis T |title=Large exons encoding multiple ectodomains are a characteristic feature of protocadherin genes |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=97 |issue= 7 |pages= 3124–9 |year= 2000 |pmid= 10716726 |doi= 10.1073/pnas.060027397 | pmc=16203 |doi-access=free }}
  • {{cite journal | author=Strausberg RL |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 | pmc=139241 |name-list-style=vanc| author2=Feingold EA | author3=Grouse LH | display-authors=3 | last4=Derge | first4=JG | last5=Klausner | first5=RD | last6=Collins | first6=FS | last7=Wagner | first7=L | last8=Shenmen | first8=CM | last9=Schuler | first9=GD |bibcode=2002PNAS...9916899M |doi-access=free }}
  • {{cite journal | author=Colland F |title=Functional Proteomics Mapping of a Human Signaling Pathway |journal=Genome Res. |volume=14 |issue= 7 |pages= 1324–32 |year= 2004 |pmid= 15231748 |doi= 10.1101/gr.2334104 | pmc=442148 |name-list-style=vanc| author2=Jacq X | author3=Trouplin V | display-authors=3 | last4=Mougin | first4=C | last5=Groizeleau | first5=C | last6=Hamburger | first6=A | last7=Meil | first7=A | last8=Wojcik | first8=J | last9=Legrain | first9=P }}
  • {{cite journal | author=Ballif BA |title=Phosphoproteomic analysis of the developing mouse brain |journal=Mol. Cell. Proteomics |volume=3 |issue= 11 |pages= 1093–101 |year= 2005 |pmid= 15345747 |doi= 10.1074/mcp.M400085-MCP200 |name-list-style=vanc| author2=Villén J | author3=Beausoleil SA | display-authors=3 | last4=Schwartz | first4=D | last5=Gygi | first5=SP |s2cid=18659460 |doi-access=free }}
  • {{cite journal | author=Rush J |title=Immunoaffinity profiling of tyrosine phosphorylation in cancer cells |journal=Nat. Biotechnol. |volume=23 |issue= 1 |pages= 94–101 |year= 2005 |pmid= 15592455 |doi= 10.1038/nbt1046 |name-list-style=vanc| author2=Moritz A | author3=Lee KA | display-authors=3 | last4=Guo | first4=Ailan | last5=Goss | first5=Valerie L | last6=Spek | first6=Erik J | last7=Zhang | first7=Hui | last8=Zha | first8=Xiang-Ming | last9=Polakiewicz | first9=Roberto D |s2cid=7200157 }}
  • {{cite journal | author=Rual JF |title=Towards a proteome-scale map of the human protein-protein interaction network |journal=Nature |volume=437 |issue= 7062 |pages= 1173–8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 |name-list-style=vanc| author2=Venkatesan K | author3=Hao T | display-authors=3 | last4=Hirozane-Kishikawa | first4=Tomoko | last5=Dricot | first5=Amélie | last6=Li | first6=Ning | last7=Berriz | first7=Gabriel F. | last8=Gibbons | first8=Francis D. | last9=Dreze | first9=Matija |bibcode=2005Natur.437.1173R |s2cid=4427026 }}
  • {{cite journal | author=Otsuki T |title=Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries |journal=DNA Res. |volume=12 |issue= 2 |pages= 117–26 |year= 2007 |pmid= 16303743 |doi= 10.1093/dnares/12.2.117 |name-list-style=vanc| author2=Ota T | author3=Nishikawa T | display-authors=3 | last4=Hayashi | first4=K | last5=Suzuki | first5=Y | last6=Yamamoto | first6=J | last7=Wakamatsu | first7=A | last8=Kimura | first8=K | last9=Sakamoto | first9=K | doi-access=free }}

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