Pyrococcus abyssi
{{Short description|Species of archaeon}}
{{Speciesbox
| image = Nitrilase Active Site.png
| image_caption = Active site of a thermoactive nitrilase from Pyrococcus abyssi detailing the Cys-Glu-Lys catalytic triad.
| taxon = Pyrococcus abyssi
| authority = Erauso et al. 1993
}}
Pyrococcus abyssi is a hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent in the North Fiji Basin at {{convert|2000|m|ft}}. It is anaerobic, sulfur-metabolizing, gram-negative, coccus-shaped and highly motile. Its optimum growth temperature is {{convert|96|C|F}}. Its type strain is GE5 (CNCM I-1302).{{cite journal|display-authors=4|last1=Erauso|first1=Gaël|last2=Reysenbach|first2=Anna-Louise|last3=Godfroy|first3=Anne|last4=Meunier|first4=Jean-Roch|last5=Crump|first5=Byron|last6=Partensky|first6=Frédéric|last7=Baross|first7=JohnA|last8=Marteinsson|first8=Viggo|last9=Barbier|first9=Georges|last10=Pace|first10=NormanR|last11=Prieur|first11=Daniel|title=Pyrococcus abyssi sp. nov., a new hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent|journal=Archives of Microbiology|volume=160|issue=5|date=1993|issn=0302-8933|doi=10.1007/BF00252219|s2cid=6454891 }} Pyrococcus abyssi has been used as a model organism in studies of DNA polymerase.{{cite book|editor1=Zvi Kelman|editor2=Andrew F. Gardner|author1=Melissa Castillo-Lizardo|author2=Ghislaine Henneke|author3=Enrique Viguera|title=Replication slippage of the thermophilic DNA polymerases B and D from the Euryarchaeota Pyrococcus abyssi|pages=58|doi=10.3389/fmicb.2014.00403|pmid=25177316|pmc=4134008|journal=Frontiers in Microbiology|volume=5|date=2014-08-07|isbn=9782889194551|publisher=Frontiers Media SA|doi-access=free }} This species can also grow at high cell densities in bioreactors.{{cite book|editor1= Yves Le Gal|editor2= A. Muller-Feuga|author1=Anne Godfroy|author2=Niel Raven|author3=Richard Sharp|title=Marine Microorganisms for Industry|chapter=Continuous Culture of Pyrococcus abyssi strain ST549 in a gas-lift bioreactor|chapter-url=https://books.google.com/books?id=9CnPuCmk0gkC&dq=%22Pyrococcus+abyssi%E2%80%8E%22&pg=PA179|page=179|date=1997-01-01|access-date=2016-09-15|publisher=Editions Quae|isbn=9782905434944}}
References
{{Reflist}}
Further reading
- {{cite journal |author=Cohen GN |author2=Barbe V |author3=Flament D|display-authors=etal |title=An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi |journal=Molecular Microbiology |volume=47 |issue=6 |pages=1495–512 |date=March 2003 |pmid=12622808 |doi= 10.1046/j.1365-2958.2003.03381.x|doi-access=free }}
- {{cite journal |author=Gueguen Y |author2=Rolland JL |author3=Lecompte O|display-authors=etal |title=Characterization of two DNA polymerases from the hyperthermophilic euryarchaeon Pyrococcus abyssi |journal=European Journal of Biochemistry |volume=268 |issue=22 |pages=5961–9 |date=November 2001 |pmid=11722585 |doi= 10.1046/j.0014-2956.2001.02550.x|doi-access=free }}Cohen, Georges N., et al. "An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi." Molecular microbiology 47.6 (2003): 1495–1512.
- {{cite journal|last1=Castillo-Lizardo|first1=Melissa|last2=Henneke|first2=Ghislaine|last3=Viguera|first3=Enrique|title=Replication slippage of the thermophilic DNA polymerases B and D from the Euryarchaeota Pyrococcus abyssi|journal=Frontiers in Microbiology|date=August 2014|volume=5|issue=403|pages=403|doi=10.3389/fmicb.2014.00403|pmid=25177316|pmc=4134008|doi-access=free }}
External links
- {{EOL|11813491|Pyrococcus abyssi}}
- [http://bacdive.dsmz.de/index.php?search=16859&submit=Search Type strain of Pyrococcus abyssi at BacDive - the Bacterial Diversity Metadatabase]
{{Extremophile}}
{{Taxonbar|from=Q16988919}}
{{DEFAULTSORT:Pyrococcus abyssi}}
Category:Archaea described in 1993
{{Euryarchaeota-stub}}