Thermococcaceae

{{Short description|Family of archaea}}

{{Automatic taxobox

| name = Thermococcaceae

| image_alt = Red Thermococcaceae bacterium with multiple flagella

| image_caption = Artistic depiction of Thermococcaceae as seen using a scanning electron microscope (SEM)

| image = Pyrococcus_furiosus.png

| taxon= Thermococcaceae

| authority = Zillig et al. 1988

| subdivision_ranks = Genera

| subdivision =

}}

In taxonomy, the Thermococcaceae are a family of the Thermococcales. Almost all species within the three genera of Thermococcaceae were isolated from hydrothermal vents in the ocean. All are strictly anaerobes.{{cite book|first1=Gerrit J.|last1= Schut|author2=Gina L. Lipscomb|author3=Yejun Han|author4=Jaspreet S. Notey|author5=Robert M. Kelly|author6=Michael M. W. Adams|title=The Prokaryotes|chapter=The Family Thermococcaceae and the Order Thermococcales|volume=3|publisher=Springer Science & Business Media|pages=363–383|date=2006-10-10|isbn=978-0387254937|doi= 10.1007/978-3-642-38954-2_324}}

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN){{cite web |author=A.C. Parte |url=https://lpsn.dsmz.de/family/Thermococcaceae |title=Thermococcaceae |access-date=2025-02-28 |publisher=List of Prokaryotic names with Standing in Nomenclature (LPSN) |display-authors=et al.}} and National Center for Biotechnology Information (NCBI).{{cite web |author=C.L. Schoch |url=https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=2259&lvl=3&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=1&unlock |title=Thermococcaceae |access-date=2025-02-28 |publisher=National Center for Biotechnology Information (NCBI) taxonomy database |display-authors=et al.}}

class="wikitable"
colspan=1 | 16S rRNA based LTP_10_2024{{cite web |title=The LTP |url=https://imedea.uib-csic.es/mmg/ltp/#LTP| access-date=10 December 2024}}{{cite web |title=LTP_all tree in newick format |url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree |access-date=10 December 2024}}{{cite web |title=LTP_10_2024 Release Notes |url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf |access-date=10 December 2024}}

! colspan=1 | 53 marker proteins based GTDB 09-RS220{{cite web |title=GTDB release 09-RS220 |url=https://gtdb.ecogenomic.org/about#4%7C |website=Genome Taxonomy Database|access-date=10 May 2023}}{{cite web |title=ar53_r220.sp_label |url=https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/ar53_r220.sp_labels.tree |website=Genome Taxonomy Database|access-date=10 May 2023}}{{cite web |title=Taxon History |url=https://gtdb.ecogenomic.org/taxon_history/ |website=Genome Taxonomy Database|access-date=10 May 2023}}

style="vertical-align:top|

{{Clade|style=font-size:100%; line-height:90%

|label1=

|1={{clade

|1=Palaeococcus

|2={{clade

|1=Thermococcus species-group 2

|2={{clade

|1=Pyrococcus

|2=Thermococcus

}}

}}

}}

}}

|

{{Clade|style=font-size:100%; line-height:90%

|1={{clade

|1=Palaeococcus Takai et al. 2000

|2={{clade

|1=Thermococcus species-group 2

|2={{clade

|1=Thermococcus species-group 3

|2={{clade

|1=Pyrococcus Fiala & Stetter 1986

|2=Thermococcus Zillig 1983

}}

}}

}}

}}

}}

See also

References

{{Reflist}}

Further reading

  • {{ cite journal | author = Judicial Commission of the International Committee on Systematics of Prokaryotes | date = 2005 | title = The nomenclatural types of the orders Acholeplasmatales, Halanaerobiales, Halobacteriales, Methanobacteriales, Methanococcales, Methanomicrobiales, Planctomycetales, Prochlorales, Sulfolobales, Thermococcales, Thermoproteales and Verrucomicrobiales are the genera Acholeplasma, Halanaerobium, Halobacterium, Methanobacterium, Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79 | journal = Int. J. Syst. Evol. Microbiol. | volume = 55 | pages = 517–518 | pmid = 15653928 | issue = Pt 1 | doi = 10.1099/ijs.0.63548-0| doi-access = free }}
  • {{ cite journal | author = Euzeby JP | author2 = Tindall BJ | date = 2001 | title = Nomenclatural type of orders: corrections necessary according to Rules 15 and 21a of the Bacteriological Code (1990 Revision), and designation of appropriate nomenclatural types of classes and subclasses. Request for an Opinion | journal = Int. J. Syst. Evol. Microbiol. | volume = 51 | pages = 725–727 | pmid = 11321122 | issue = Pt 2 | doi=10.1099/00207713-51-2-725| doi-access = free }}
  • {{ cite journal | display-authors = 6 | author = Zillig W | author2 = Holz I | author3 = Klenk HP | author4 = Trent J | author5 = Wunderl S | author6 = Janekovic D | author7 = Imsel E | author8 = Haas B | date = 1987 | title = Pyrococcus woesei, sp. nov., an ultra-thermophilic marine Archaebacterium, representing a novel order, Thermococcales | journal = Syst. Appl. Microbiol. | volume = 9 | issue = 1–2 | pages = 62–70 | doi = 10.1016/S0723-2020(87)80057-7 }}

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Category:Archaea taxonomic families

Category:Euryarchaeota

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