esyN
{{Infobox software
| name = esyN (Easy Networks)
| title =
| logo =
| logo caption =
| screenshot =
| caption = esyN home page
| collapsible =
| author = [http://www.sysbiol.cam.ac.uk/ Cambridge Systems Biology Centre]
| developer =
| released = September 2014
| discontinued =
| latest release version = 2.1
| latest release date = {{Start date and age|2016|01|17|df=yes/no}}
| latest preview version =
| latest preview date =
| programming language = JavaScript
| operating system =
| platform =
| size =
| language =
| language count =
| language footnote =
| genre = Bioinformatics software
| license =
| alexa =
| website = {{URL|http://www.esyn.org/}}
| standard =
| AsOf =
}}
esyN (Easy Networks){{cite journal |author=Bean|display-authors=etal|title=esyN: Network Building, Sharing and Publishing. |journal=PLOS ONE |volume=9 |issue=9 |pages=e106035 |year=2014 |pmid=25181461 |doi= 10.1371/journal.pone.0106035 |pmc=4152123|doi-access=free}}{{cite journal |author=Hoffman|display-authors=etal|title=An Ancient Yeast for Young Geneticists: A Primer on the Schizosaccharomyces pombe Model System |journal=Genetics |volume=201 |issue=2 |pages=403–423 |year=2015 |pmid= 26447128|url=http://genetics.org/content/201/2/403.long |pmc=4596657 |doi=10.1534/genetics.115.181503}} is a bioinformatics web-tool for visualizing, building and analysing molecular interaction networks. esyN is based on cytoscape.js and its aim is to make it easy for everybody to perform network analysis.
esyN is connected with a number of databases - specifically: pombase, flybase, and most InterMine data warehouses, DrugBank, and BioGRID from which its possible to download the protein protein or genetic interactions for any protein or gene in a number of different organisms.
Networks published in esyN can be easily published in other websites using the
Usage
As of January 2016 esyN is being viewed by 1500 unique users a day (about 16000 a month) according to Google Analytics.
The embedding capabilities of esyN are used by a number of databases to display their interaction data:
- FlyBase{{cite web |title=Physical Interaction report |url=http://flybase.org/reports/FBig0000095901.html |work=FlyBase |date=21 December 2018 |accessdate=10 February 2019}}
- FlyMine{{cite web |title= Allele : ttk[MI01174] D. melanogaster |url=http://www.flymine.org/flymine/report.do?id=1007664 |work=FlyMine |date=November 2018 |accessdate=10 February 2019}}
- HumanMine{{cite web |title=Report page |url=http://www.humanmine.org/humanmine/report.do?id=127344656&trail={{!}}127344656 |work=HumanMine |date=November 2018 |accessdate=10 February 2019}}
- PomBase{{cite journal | vauthors = Rutherford KM, Lera-Ramírez M, Wood V | title = PomBase: a Global Core Biodata Resource—growth, collaboration, and sustainability | journal = Genetics | volume = 227 | issue = 1 | date = May 2024 | pmid = 38376816 | pmc = 11075564 | doi = 10.1093/genetics/iyae007 }}
See also
References
{{Reflist}}
External links
- {{Official website|http://www.esyn.org/}}
Category:Bioinformatics software
Category:Metabolomic databases