floc (biofilm)
{{Short description|Type of microbial aggregate suspension}}File:Zoogloea floc vs planktonic.tiffA floc is a type of microbial aggregate that may be contrasted with biofilms and granules, or else considered a specialized type of biofilm.{{cite journal | vauthors = Davey ME, O'toole GA | title = Microbial biofilms: from ecology to molecular genetics | journal = Microbiology and Molecular Biology Reviews | volume = 64 | issue = 4 | pages = 847–67 | date = December 2000 | pmid = 11104821 | pmc = 99016 | doi = 10.1128/mmbr.64.4.847-867.2000}} Flocs appear as cloudy suspensions of cells floating in water, rather than attached to and growing on a surface like most biofilms. The floc typically is held together by a matrix of extracellular polymeric substance (EPS), which may contain variable amounts of polysaccharide, protein, and other biopolymers.{{Cite journal |last=Su |first=Haoning |last2=Li |first2=Wenjiao |last3=Okumura |first3=Shinya |last4=Ishiguro |first4=Yasushi |last5=Wei |first5=Yongfen |last6=Li |first6=Fusheng |date=2023-12-01 |title=Factors affecting the performance of on-site aerated fluidized-biofilm carrier reactors treating individual household wastewater |url=https://www.sciencedirect.com/science/article/pii/S2214714423008607 |journal=Journal of Water Process Engineering |volume=56 |pages=104340 |doi=10.1016/j.jwpe.2023.104340 |issn=2214-7144}} The formation and the properties of flocs may affect the performance of industrial water treatment bioreactors such as activated sludge systems where the flocs form a sludge blanket.
Floc formation may benefit the constituent microorganisms in a number of ways, including protection from pH stress,{{cite journal | vauthors = Charles CJ, Rout SP, Patel KA, Akbar S, Laws AP, Jackson BR, Boxall SA, Humphreys PN | title = Floc Formation Reduces the pH Stress Experienced by Microorganisms Living in Alkaline Environments | journal = Applied and Environmental Microbiology | volume = 83 | issue = 6 | date = March 2017 | pmid = 28087527 | pmc = 5335526 | doi = 10.1128/AEM.02985-16 }} resistance to predation, manipulation of microenvironments, and facilitation of mutualistic relationships in mixed microbial communities.
In general, the mechanisms by which flocculating microbial aggregates hold together are poorly understood. However, work on the activated sludge bacterium Zoogloea resiniphila has shown that PEP-CTERM proteins must be expressed for flocs to form; in their absence, growth is planktonic, even though exopolysaccharide is produced.{{cite journal | vauthors = Gao N, Xia M, Dai J, Yu D, An W, Li S, Liu S, He P, Zhang L, Wu Z, Bi X, Chen S, Haft DH, Qiu D | title = Both widespread PEP-CTERM proteins and exopolysaccharides are required for floc formation of Zoogloea resiniphila and other activated sludge bacteria | journal = Environmental Microbiology | volume = 20 | issue = 5 | pages = 1677–1692 | date = May 2018 | pmid = 29473278 | doi = 10.1111/1462-2920.14080 | s2cid = 4341022 | url = http://ir.ihb.ac.cn/handle/342005/29334 | access-date = 2019-12-13 | archive-date = 2021-01-21 | archive-url = https://web.archive.org/web/20210121055907/http://ir.ihb.ac.cn/handle/342005/29334 | url-status = dead }}