macrosatellite

{{Short description|Repeating segment of DNA (thousands of base pairs)}}

In genetics, macrosatellites are the largest of the tandem repeats within DNA. Each macrosatellite repeat typically is several thousand base pairs in length, and the entire repeat array often spans hundreds of kilobases.{{cite journal |last1=Dumbovic |first1=G |last2=Forcales |first2=SV |last3=Perucho |first3=M |title=Emerging roles of macrosatellite repeats in genome organization and disease development. |journal=Epigenetics |date=3 July 2017 |volume=12 |issue=7 |pages=515–526 |doi=10.1080/15592294.2017.1318235 |pmid=28426282|pmc=5687341 }} Reduced number of repeats on chromosome 4 (D4Z4 repeats) causes euchromatization of local DNA and is the predominant cause of facioscapulohumeral muscular dystrophy (FSHD).{{cite journal |last1=Wagner |first1=Kathryn R. |s2cid=208531681 |title=Facioscapulohumeral Muscular Dystrophies |journal=CONTINUUM: Lifelong Learning in Neurology |date=December 2019 |volume=25 |issue=6 |pages=1662–1681 |doi=10.1212/CON.0000000000000801|pmid=31794465 }} Other macrosatellites are RS447, NBL2 and DXZ4,{{cite journal |last1=Horakova |first1=AH |last2=Moseley |first2=SC |last3=McLaughlin |first3=CR |last4=Tremblay |first4=DC |last5=Chadwick |first5=BP |title=The macrosatellite DXZ4 mediates CTCF-dependent long-range intrachromosomal interactions on the human inactive X chromosome. |journal=Human Molecular Genetics |date=15 October 2012 |volume=21 |issue=20 |pages=4367–77 |doi=10.1093/hmg/dds270 |pmid=22791747|pmc=3459461 }}{{Cite journal|last1=Thoraval|first1=Didier|last2=Asakawa|first2=Jun-ichi|last3=Wimmer|first3=Katharina|last4=Kuick|first4=Rork|last5=Lamb|first5=Barbara|last6=Richardson|first6=Bruce|last7=Ambros|first7=Peter|last8=Glover|first8=Thomas|last9=Hanash|first9=Samir|date=1996|title=Demethylation of repetitive DNA sequences in neuroblastoma|url=https://onlinelibrary.wiley.com/doi/abs/10.1002/%28SICI%291098-2264%28199612%2917%3A4%3C234%3A%3AAID-GCC5%3E3.0.CO%3B2-4|journal=Genes, Chromosomes and Cancer|language=en|volume=17|issue=4|pages=234–244|doi=10.1002/(SICI)1098-2264(199612)17:4<234::AID-GCC5>3.0.CO;2-4|pmid=8946205|s2cid=30585909 |issn=1098-2264|url-access=subscription}}{{Cite journal|last1=Dumbović|first1=Gabrijela|last2=Biayna|first2=Josep|last3=Banús|first3=Jordi|last4=Samuelsson|first4=Johanna|last5=Roth|first5=Anna|last6=Diederichs|first6=Sven|last7=Alonso|first7=Sergio|last8=Buschbeck|first8=Marcus|last9=Perucho|first9=Manuel|last10=Forcales|first10=Sonia-V|date=2018-06-20|title=A novel long non-coding RNA from NBL2 pericentromeric macrosatellite forms a perinucleolar aggregate structure in colon cancer|url= |journal=Nucleic Acids Research|volume=46|issue=11|pages=5504–5524|doi=10.1093/nar/gky263|issn=0305-1048|pmc=6009586|pmid=29912433}} although RS447 is also commonly referred to as a "megasatellite."

class="wikitable sortable"

|+ Macrosatellite repeats

NameChromosomeRepeat size (kbp)Repeat numberEncoded genesNon-coding RNAClinical relevance
D4Z44, 103.31-150DUX4DBE-TFSHD
DXZ4X350-100NoneX-inactivation
RS44744.720-103USP17
NBL213, 14, 15, 211.4Not determinedNoneTNBLcancer
RNU2176.15-82None
TAF11-Like53.410-98TAF11possibly schizophrenia
CT47X4.84-17CT47

See also

References

{{reflist}}

{{Repeated sequence}}

Category:Genetics

Category:Repetitive DNA sequences

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