Humanin
{{Short description|A micropeptide encoded by mitochondrial DNA and showing cytoprotective effects}}
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{{infobox gene}}
File:Humanin diagram for wikipedia.png
Humanin is a micropeptide encoded in the mitochondrial genome by the 16S ribosomal RNA gene, MT-RNR2. Its structure contains a three-turn α-helix, and no symmetry.
In in vitro and animal models, it appears to have cytoprotective effects.{{cite journal | vauthors=Cai H, Liu Y, Men H, Zheng Y | title=Protective Mechanism of Humanin Against Oxidative Stress in Aging-Related Cardiovascular Diseases | journal=Frontiers in Endocrinology | volume=12 | pages=683151 | year=2021 | doi = 10.3389/fendo.2021.683151 | pmc=8222669 | pmid=34177809 | doi-access=free }}{{cite journal | vauthors=Conte M, Martucci M, Franceschi C, Salvioli S | title=Mitochondria, immunosenescence and inflammaging: a role for mitokines? | journal=Seminars in Immunopathology | volume=42 | issue=5 | pages=607–617 | year=2020 | doi = 10.1007/s00281-020-00813-0 | pmc=7666292 | pmid=32757036}}{{cite journal | vauthors=Miller B, Kim S, Cohen P | title=Mitochondria-derived peptides in aging and healthspan | journal=Journal of Clinical Investigation | volume=132 | issue=9 | pages=e158449 | year=2022 | doi = 10.1172/JCI158449 | pmc=9057581 | pmid=35499074}}{{cite journal | vauthors=Burtscher J, Soltany A, Khamoui AV | title=Mitochondrial stress and mitokines in aging | journal=Aging Cell | volume=22 | issue=2 | pages=e13770 | year=2023 | doi = 10.1111/acel.13770 | pmc=9924952 | pmid=36642986}}
Gene
Humanin is encoded in the mitochondrial genome by the 16S ribosomal RNA gene, MT-RNR2.{{cite journal | vauthors = Hashimoto Y, Niikura T, Tajima H, Yasukawa T, Sudo H, Ito Y, Kita Y, Kawasumi M, Kouyama K, Doyu M, Sobue G, Koide T, Tsuji S, Lang J, Kurokawa K, Nishimoto I | title = A rescue factor abolishing neuronal cell death by a wide spectrum of familial Alzheimer's disease genes and Abeta | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 98 | issue = 11 | pages = 6336–41 | date = May 2001 | pmid = 11371646 | pmc = 33469 | doi = 10.1073/pnas.101133498 | bibcode = 2001PNAS...98.6336H | doi-access = free }} Multiple paralogs are found in the nuclear genome (due to nuclear mitochondrial DNA segments) and are named MTRNR2L followed by a number. It is not entirely sure whether these paralogous isoforms are completely unexpressed.{{cite journal | vauthors = Bodzioch M, Lapicka-Bodzioch K, Zapala B, Kamysz W, Kiec-Wilk B, Dembinska-Kiec A | title = Evidence for potential functionality of nuclearly-encoded humanin isoforms | journal = Genomics | volume = 94 | issue = 4 | pages = 247–56 | date = October 2009 | pmid = 19477263 | doi = 10.1016/j.ygeno.2009.05.006 | doi-access = free }}
Protein
The expressed peptide{{cite journal | vauthors = Benaki D, Zikos C, Evangelou A, Livaniou E, Vlassi M, Mikros E, Pelecanou M | title = Solution structure of humanin, a peptide against Alzheimer's disease-related neurotoxicity | journal = Biochemical and Biophysical Research Communications | volume = 329 | issue = 1 | pages = 152–60 | date = April 2005 | pmid = 15721287 | doi = 10.1016/j.bbrc.2005.01.100 | url = http://www.rcsb.org/pdb/explore/remediatedSequence.do?structureId=1Y32 | access-date = 2014-07-07 | archive-date = 2015-02-08 | archive-url = https://web.archive.org/web/20150208221157/http://www.rcsb.org/pdb/explore/remediatedSequence.do?structureId=1Y32 | url-status = dead }} contains a three-turn α-helix, and has no symmetry.
The length of the peptide depends on where it is produced. If it is produced inside the mitochondria it will be 21 amino acids long.{{cite journal | vauthors = Yen K, Lee C, Mehta H, Cohen P | title = The emerging role of the mitochondrial-derived peptide humanin in stress resistance | journal = Journal of Molecular Endocrinology | volume = 50 | issue = 1 | pages = R11-9 | date = February 2013 | pmid = 23239898 | pmc = 3705736 | doi = 10.1530/JME-12-0203 | orig-year = 2013 | publication-date = Feb 2013 | authorlink4 = hassy@usc.edu }} If it is produced outside the mitochondria, in the cytosol, it will be 24 amino acids long. Both peptides have been shown to have biological activity.{{cite journal | vauthors = Guo B, Zhai D, Cabezas E, Welsh K, Nouraini S, Satterthwait AC, Reed JC | title = Humanin peptide suppresses apoptosis by interfering with Bax activation | journal = Nature | volume = 423 | issue = 6938 | pages = 456–61 | date = May 2003 | pmid = 12732850 | doi = 10.1038/nature01627 | bibcode = 2003Natur.423..456G | s2cid = 4423176 }}
Other species
Humanin is the most well-conserved of the mitochondria-derived peptides, found in such diverse species as humans, naked mole rats, and nematodes. Overexpression of humanin in Caenorhabditis elegans has been shown to extend the lifespan of that nematode by increasing autophagy.
The rat, Rattus norvegicus, has a gene, rattin ({{UniProt|C0HLU6}}, "Humanin-like protein"), that encodes a 38 amino acid peptide homologous to humanin.{{cite journal | vauthors = Caricasole A, Bruno V, Cappuccio I, Melchiorri D, Copani A, Nicoletti F | title = A novel rat gene encoding a Humanin-like peptide endowed with broad neuroprotective activity | journal = FASEB Journal | volume = 16 | issue = 10 | pages = 1331–3 | date = August 2002 | pmid = 12154011 | doi = 10.1096/fj.02-0018fje | doi-access = free | s2cid = 31415552 | orig-year = 2002 | publication-date = August 2002 | authorlink1 = andrea.caricasole@uniroma1.it }} The two genes produce cDNAs that show 88% sequence identity. The peptides are 81% identical, with the carboxyl terminal sequence in rattin being 14 amino acids longer than in humanin. Of the 24 amino acids in the rest of the rat sequence, 20 are identical to the amino acids in the human sequence.
The mouse MT-RNR2 humanin ortholog is a pseudogene, so no humanin is produced from the mtDNA. However, the nuclear genome harbors (like in humans) many copies of mitochondrial genomes, and one copy of the humanin homolog, Gm20594 ({{UniProt|J3QJY3}}), is actively expressed.{{cite journal |last1=Kim |first1=J |last2=Choi |first2=JW |last3=Namkung |first3=J |title=Expression Profile of Mouse Gm20594, Nuclear-Encoded Humanin-Like Gene. |journal=Journal of Lifestyle Medicine |date=31 January 2021 |volume=11 |issue=1 |pages=13–22 |doi=10.15280/jlm.2021.11.1.13 |pmid=33763338|pmc=7957044 }}
Function
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Humanin has several cytoprotective effects.{{cite journal | vauthors = Kim SJ, Xiao J, Wan J, Cohen P, Yen K | title = Mitochondrially derived peptides as novel regulators of metabolism | journal = The Journal of Physiology | volume = 595 | issue = 21 | pages = 6613–6621 | date = November 2017 | pmid = 28574175 | pmc = 5663826 | doi = 10.1113/JP274472 }}
Interactions
Extracellular interaction with a tripartite receptor composed of gp130, WSX1, and CNTFR, as well as interaction with the formyl peptide receptor 2 (formylpeptide-like-1 receptor) have been published.{{cite journal | vauthors = Hashimoto Y, Kurita M, Aiso S, Nishimoto I, Matsuoka M | title = Humanin inhibits neuronal cell death by interacting with a cytokine receptor complex or complexes involving CNTF receptor alpha/WSX-1/gp130 | journal = Molecular Biology of the Cell | volume = 20 | issue = 12 | pages = 2864–73 | date = June 2009 | pmid = 19386761 | pmc = 2695794 | doi = 10.1091/mbc.E09-02-0168 }}{{cite journal | vauthors = Ying G, Iribarren P, Zhou Y, Gong W, Zhang N, Yu ZX, Le Y, Cui Y, Wang JM | title = Humanin, a newly identified neuroprotective factor, uses the G protein-coupled formylpeptide receptor-like-1 as a functional receptor | journal = Journal of Immunology | volume = 172 | issue = 11 | pages = 7078–85 | date = June 2004 | pmid = 15153530 | doi = 10.4049/jimmunol.172.11.7078 | doi-access = free }}
Intracellular interaction with BAX, tBID, IGFBP3, and TRIM11 may also be required for the effects of humanin.{{cite journal | vauthors = Zhai D, Luciano F, Zhu X, Guo B, Satterthwait AC, Reed JC | title = Humanin binds and nullifies Bid activity by blocking its activation of Bax and Bak | journal = The Journal of Biological Chemistry | volume = 280 | issue = 16 | pages = 15815–24 | date = April 2005 | pmid = 15661737 | doi = 10.1074/jbc.M411902200 | doi-access = free }}{{cite journal | vauthors = Niikura T, Hashimoto Y, Tajima H, Ishizaka M, Yamagishi Y, Kawasumi M, Nawa M, Terashita K, Aiso S, Nishimoto I | title = A tripartite motif protein TRIM11 binds and destabilizes Humanin, a neuroprotective peptide against Alzheimer's disease-relevant insults | journal = The European Journal of Neuroscience | volume = 17 | issue = 6 | pages = 1150–8 | date = March 2003 | pmid = 12670303 | doi = 10.1046/j.1460-9568.2003.02553.x | s2cid = 1345339 }}
Discovery
Humanin was the first mitochondria-derived peptide to be discovered. Humanin was independently found by three different labs looking at different parameters. The first to publish, in 2001, was the Nishimoto lab, which found humanin while looking for possible proteins that could protect cells from amyloid beta, a major component of Alzheimer's disease. The Reed lab found humanin when screening for proteins that could interact with Bcl-2-associated X protein (Bax), a major protein involved in apoptosis. The Pinchas Cohen lab independently discovered humanin when screening for proteins that interact with IGFBP3.{{cite journal | vauthors = Ikonen M, Liu B, Hashimoto Y, Ma L, Lee KW, Niikura T, Nishimoto I, Cohen P | title = Interaction between the Alzheimer's survival peptide humanin and insulin-like growth factor-binding protein 3 regulates cell survival and apoptosis | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 100 | issue = 22 | pages = 13042–7 | date = October 2003 | pmid = 14561895 | pmc = 240741 | doi = 10.1073/pnas.2135111100 | bibcode = 2003PNAS..10013042I | doi-access = free }}
Research
Experiments using cultured cells have demonstrated that humanin has both neuroprotective as well as cytoprotective effects and experiments in rodents have found that it has protective effects in Alzheimer's disease models, Huntington's disease models and stroke models.{{cite journal | vauthors = Yen K, Lee C, Mehta H, Cohen P | title = The emerging role of the mitochondrial-derived peptide humanin in stress resistance | journal = Journal of Molecular Endocrinology | volume = 50 | issue = 1 | pages = R11-9 | date = February 2013 | pmid = 23239898 | pmc = 3705736 | doi = 10.1530/JME-12-0203 }}
Humanin is proposed to have myriad neuroprotective and cytoprotective effects. Both studies in cells and rodents have both found that administration of humanin or humanin derivatives increases survival and/or physiological parameters in Alzheimer's disease models.{{cite journal | vauthors = Tajima H, Kawasumi M, Chiba T, Yamada M, Yamashita K, Nawa M, Kita Y, Kouyama K, Aiso S, Matsuoka M, Niikura T, Nishimoto I | title = A humanin derivative, S14G-HN, prevents amyloid-beta-induced memory impairment in mice | journal = Journal of Neuroscience Research | volume = 79 | issue = 5 | pages = 714–23 | date = March 2005 | pmid = 15678515 | doi = 10.1002/jnr.20391 | s2cid = 25194143 }}{{cite journal | vauthors = Hashimoto Y, Niikura T, Ito Y, Sudo H, Hata M, Arakawa E, Abe Y, Kita Y, Nishimoto I | title = Detailed characterization of neuroprotection by a rescue factor humanin against various Alzheimer's disease-relevant insults | journal = The Journal of Neuroscience | volume = 21 | issue = 23 | pages = 9235–45 | date = December 2001 | pmid = 11717357 | pmc = 6763898 | doi = 10.1523/JNEUROSCI.21-23-09235.2001 }} In addition to Alzheimer's disease, humanin has other neuroprotective effects against models of Huntington's disease, prion disease, and stroke.{{cite journal | vauthors = Kariya S, Hirano M, Nagai Y, Furiya Y, Fujikake N, Toda T, Ueno S | title = Humanin attenuates apoptosis induced by DRPLA proteins with expanded polyglutamine stretches | journal = Journal of Molecular Neuroscience | volume = 25 | issue = 2 | pages = 165–9 | year = 2005 | pmid = 15784964 | doi = 10.1385/JMN:25:2:165 | s2cid = 23766205 }}{{cite journal | vauthors = Sponne I, Fifre A, Koziel V, Kriem B, Oster T, Pillot T | title = Humanin rescues cortical neurons from prion-peptide-induced apoptosis | journal = Molecular and Cellular Neurosciences | volume = 25 | issue = 1 | pages = 95–102 | date = January 2004 | pmid = 14962743 | doi = 10.1016/j.mcn.2003.09.017 | s2cid = 20276062 }}{{cite journal | vauthors = Xu X, Chua CC, Gao J, Hamdy RC, Chua BH | title = Humanin is a novel neuroprotective agent against stroke | journal = Stroke | volume = 37 | issue = 10 | pages = 2613–9 | date = October 2006 | pmid = 16960089 | doi = 10.1161/01.STR.0000242772.94277.1f | doi-access = free }}
Beyond the possible neuroprotective effects, humanin protects against oxidative stress, atherosclerotic plaque formation, and heart attack.{{cite journal | vauthors = Bachar AR, Scheffer L, Schroeder AS, Nakamura HK, Cobb LJ, Oh YK, Lerman LO, Pagano RE, Cohen P, Lerman A | title = Humanin is expressed in human vascular walls and has a cytoprotective effect against oxidized LDL-induced oxidative stress | journal = Cardiovascular Research | volume = 88 | issue = 2 | pages = 360–6 | date = November 2010 | pmid = 20562421 | pmc = 2952532 | doi = 10.1093/cvr/cvq191 }}{{cite journal | vauthors = Oh YK, Bachar AR, Zacharias DG, Kim SG, Wan J, Cobb LJ, Lerman LO, Cohen P, Lerman A | title = Humanin preserves endothelial function and prevents atherosclerotic plaque progression in hypercholesterolemic ApoE deficient mice | journal = Atherosclerosis | volume = 219 | issue = 1 | pages = 65–73 | date = November 2011 | pmid = 21763658 | pmc = 3885346 | doi = 10.1016/j.atherosclerosis.2011.06.038 }}{{cite journal | vauthors = Zacharias DG, Kim SG, Massat AE, Bachar AR, Oh YK, Herrmann J, Rodriguez-Porcel M, Cohen P, Lerman LO, Lerman A | title = Humanin, a cytoprotective peptide, is expressed in carotid atherosclerotic [corrected] plaques in humans | journal = PLOS ONE | volume = 7 | issue = 2 | pages = e31065 | year = 2012 | pmid = 22328926 | pmc = 3273477 | doi = 10.1371/journal.pone.0031065 | editor1-last = Westermark | bibcode = 2012PLoSO...731065Z | editor1-first = Per | doi-access = free }}{{cite journal | vauthors = Muzumdar RH, Huffman DM, Calvert JW, Jha S, Weinberg Y, Cui L, Nemkal A, Atzmon G, Klein L, Gundewar S, Ji SY, Lavu M, Predmore BL, Lefer DJ | title = Acute humanin therapy attenuates myocardial ischemia and reperfusion injury in mice | journal = Arteriosclerosis, Thrombosis, and Vascular Biology | volume = 30 | issue = 10 | pages = 1940–8 | date = October 2010 | pmid = 20651283 | pmc = 2941397 | doi = 10.1161/ATVBAHA.110.205997 }} Humanin activates chaperone-mediated autophagy in a dose-dependent manner. Humanin decreases production of inflammatory cytokines, which is part of its anti-apoptotic effect. Metabolic effects have also been demonstrated and humanin helps improve survival of pancreatic beta-cells, which may help with type 1 diabetes,{{cite journal | vauthors = Hoang PT, Park P, Cobb LJ, Paharkova-Vatchkova V, Hakimi M, Cohen P, Lee KW | title = The neurosurvival factor Humanin inhibits beta-cell apoptosis via signal transducer and activator of transcription 3 activation and delays and ameliorates diabetes in nonobese diabetic mice | journal = Metabolism | volume = 59 | issue = 3 | pages = 343–9 | date = March 2010 | pmid = 19800083 | pmc = 2932671 | doi = 10.1016/j.metabol.2009.08.001 }} and increases insulin sensitivity, which may help with type 2 diabetes.{{cite journal | vauthors = Muzumdar RH, Huffman DM, Atzmon G, Buettner C, Cobb LJ, Fishman S, Budagov T, Cui L, Einstein FH, Poduval A, Hwang D, Barzilai N, Cohen P | title = Humanin: a novel central regulator of peripheral insulin action | journal = PLOS ONE | volume = 4 | issue = 7 | pages = e6334 | date = July 2009 | pmid = 19623253 | pmc = 2709436 | doi = 10.1371/journal.pone.0006334 | editor1-last = Vella | bibcode = 2009PLoSO...4.6334M | editor1-first = Adrian | doi-access = free }} In rats, the humanin analog appears to normalize glucose levels and reduce diabetes symptoms.{{cite news|last1=Hall|first1=Stephen S.|title=New Clues to a Long Life|url=http://ngm.nationalgeographic.com/2013/05/longevity/hall-text|access-date=30 August 2017|agency=National Geographic|date=March 2012|archive-date=30 August 2017|archive-url=https://web.archive.org/web/20170830235925/http://ngm.nationalgeographic.com/2013/05/longevity/hall-text|url-status=dead}}
Rattin shows the same ability as humanin to defend neurons from the toxicity of beta-amyloid, associated with the degeneration in Alzheimer's disease.
Small humanin-like peptides are a group of peptides found in the mitochondrial 16S rRNA, and also possess retrograde signaling functions.