Prosthetic group

{{Short description|Covalently bonded non-protein part of an enzyme}}

A prosthetic group is the non-amino acid component that is part of the structure of the heteroproteins or conjugated proteins, being tightly linked to the apoprotein.

Not to be confused with the cosubstrate that binds to the enzyme apoenzyme (either a holoprotein or heteroprotein) by non-covalent binding a non-protein (non-amino acid)

This is a component of a conjugated protein that is required for the protein's biological activity.{{cite web |url=http://www.chem.qmul.ac.uk/iupac/bioinorg/PR.html#24 |title=Glossary of Terms Used in Bioinorganic Chemistry: Prosthetic groups |accessdate=2007-10-30 |last=de Bolster |first=M.W.G. |date=1997 |publisher=International Union of Pure and Applied Chemistry |archive-url=https://web.archive.org/web/20121128194239/http://www.chem.qmul.ac.uk/iupac/bioinorg/PR.html#24 |archive-date=2012-11-28 |url-status=dead }} The prosthetic group may be organic (such as a vitamin, sugar, RNA, phosphate or lipid) or inorganic (such as a metal ion). Prosthetic groups are bound tightly to proteins and may even be attached through a covalent bond. They often play an important role in enzyme catalysis. A protein without its prosthetic group is called an apoprotein, while a protein combined with its prosthetic group is called a holoprotein. A non-covalently bound prosthetic group cannot generally be removed from the holoprotein without denaturating the protein. Thus, the term "prosthetic group" is a very general one and its main emphasis is on the tight character of its binding to the apoprotein. It defines a structural property, in contrast to the term "coenzyme" that defines a functional property.

Prosthetic groups are a subset of cofactors. Loosely bound metal ions and coenzymes are still cofactors, but are generally not called prosthetic groups.Metzler DE (2001) Biochemistry. The chemical reactions of living cells, 2nd edition, Harcourt, San Diego.Nelson DL and Cox M.M (2000) Lehninger, Principles of Biochemistry, 3rd edition, Worth Publishers, New York Campbell MK and Farrell SO (2009) Biochemistry, 6th edition, Thomson Brooks/Cole, Belmont, California In enzymes, prosthetic groups are involved in the catalytic mechanism and required for activity. Other prosthetic groups have structural properties. This is the case for the sugar and lipid moieties in glycoproteins and lipoproteins or RNA in ribosomes. They can be very large, representing the major part of the protein in proteoglycans for instance.

The heme group in hemoglobin is a prosthetic group. Further examples of organic prosthetic groups are vitamin derivatives: thiamine pyrophosphate, pyridoxal-phosphate and biotin. Since prosthetic groups are often vitamins or made from vitamins, this is one of the reasons why vitamins are required in the human diet. Inorganic prosthetic groups are usually transition metal ions such as iron (in heme groups, for example in cytochrome c oxidase and hemoglobin), zinc (for example in carbonic anhydrase), copper (for example in complex IV of the respiratory chain) and molybdenum (for example in nitrate reductase).

List of prosthetic groups

The table below contains a list of some of the most common prosthetic groups.

class="wikitable"

! Prosthetic group

FunctionDistribution
Flavin mononucleotide {{cite journal |author=Joosten V, van Berkel WJ |title=Flavoenzymes |journal=Curr Opin Chem Biol |volume=11 |issue=2 |pages=195–202 |year=2007 |pmid=17275397 |doi=10.1016/j.cbpa.2007.01.010}}Redox reactionsBacteria, archaea and eukaryotes
Flavin adenine dinucleotide Redox reactionsBacteria, archaea and eukaryotes
Pyrroloquinoline quinone {{cite journal | author = Salisbury SA, Forrest HS, Cruse WB, Kennard O | title = A novel coenzyme from bacterial primary alcohol dehydrogenases | journal = Nature | year = 1979 | volume = 280 | issue = 5725 | pages = 843–4 | doi = 10.1038/280843a0| pmid = 471057 | bibcode = 1979Natur.280..843S | s2cid = 3094647 }} {{PMID|471057}}Redox reactionsBacteria
Pyridoxal phosphate {{cite journal |author=Eliot AC, Kirsch JF |title=Pyridoxal phosphate enzymes: mechanistic, structural, and evolutionary considerations |journal=Annu. Rev. Biochem. |volume=73 |pages=383–415 |year=2004 |pmid=15189147 |doi=10.1146/annurev.biochem.73.011303.074021}}Transamination, decarboxylation and deaminationBacteria, archaea and eukaryotes
Biotin {{cite journal |author=Jitrapakdee S, Wallace JC |title=The biotin enzyme family: conserved structural motifs and domain rearrangements |journal=Curr. Protein Pept. Sci. |volume=4 |issue=3 |pages=217–29 |year=2003 |pmid=12769720 |doi=10.2174/1389203033487199}}CarboxylationBacteria, archaea and eukaryotes
Methylcobalamin {{cite journal |author=Banerjee R, Ragsdale SW |title=The many faces of vitamin B12: catalysis by cobalamin-dependent enzymes |journal=Annu. Rev. Biochem. |volume=72 |pages=209–47 |year=2003 |pmid=14527323 |doi=10.1146/annurev.biochem.72.121801.161828|s2cid=37393683 |url=https://digitalcommons.unl.edu/cgi/viewcontent.cgi?article=1458&context=biochemfacpub }}Methylation and isomerisationBacteria, archaea and eukaryotes
Thiamine pyrophosphate {{cite journal |author=Frank RA, Leeper FJ, Luisi BF |title=Structure, mechanism and catalytic duality of thiamine-dependent enzymes |journal=Cell. Mol. Life Sci. |volume=64 |issue=7–8 |pages=892–905 |year=2007 |pmid=17429582 |doi=10.1007/s00018-007-6423-5|s2cid=20415735 |pmc=11136255 }}Transfer of 2-carbon groups, α cleavageBacteria, archaea and eukaryotes
Heme {{cite journal |author=Wijayanti N, Katz N, Immenschuh S |title=Biology of heme in health and disease |journal=Curr. Med. Chem. |volume=11 |issue=8 |pages=981–6 |year=2004 |pmid=15078160 |doi=10.2174/0929867043455521}}Oxygen binding and redox reactionsBacteria, archaea and eukaryotes
Molybdopterin {{cite journal |author=Mendel RR, Hänsch R |title=Molybdoenzymes and molybdenum cofactor in plants |journal=J. Exp. Bot. |volume=53 |issue=375 |pages=1689–98 |year=2002 |pmid=12147719 |doi=10.1093/jxb/erf038|doi-access=free }}{{cite journal |author=Mendel RR, Bittner F |title=Cell biology of molybdenum |journal=Biochim. Biophys. Acta |volume=1763 |issue=7 |pages=621–35 |year=2006 |pmid=16784786 |doi=10.1016/j.bbamcr.2006.03.013|doi-access= }}Oxygenation reactionsBacteria, archaea and eukaryotes
Lipoic acid {{cite journal |author=Bustamante J, Lodge JK, Marcocci L, Tritschler HJ, Packer L, Rihn BH |title=Alpha-lipoic acid in liver metabolism and disease |journal=Free Radic. Biol. Med. |volume=24 |issue=6 |pages=1023–39 |year=1998 |pmid=9607614 |doi=10.1016/S0891-5849(97)00371-7}}Redox reactionsBacteria, archaea and eukaryotes
Cofactor F430

|Methanogenesis

|Archaea

References

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