Calcineurin

{{Short description|Class of enzymes}}

File:Protein PPP3CA PDB 1aui.png) and regulatory (PPP3R1) subunits.{{PDB|1AUI}}; {{cite journal | vauthors = Kissinger CR, Parge HE, Knighton DR, Lewis CT, Pelletier LA, Tempczyk A, Kalish VJ, Tucker KD, Showalter RE, Moomaw EW | title = Crystal structures of human calcineurin and the human FKBP12-FK506-calcineurin complex | journal = Nature | volume = 378 | issue = 6557 | pages = 641–4 |date=December 1995 | pmid = 8524402 | doi = 10.1038/378641a0 | bibcode = 1995Natur.378..641K | s2cid = 4337105 }}]]

Calcineurin (CaN) is a calcium and calmodulin dependent serine/threonine protein phosphatase (also known as protein phosphatase 3, and calcium-dependent serine-threonine phosphatase).{{cite journal | vauthors = Liu L, Zhang J, Yuan J, Dang Y, Yang C, Chen X, Xu J, Yu L | title = Characterization of a human regulatory subunit of protein phosphatase 3 gene (PPP3RL) expressed specifically in testis | journal = Mol. Biol. Rep. | volume = 32 | issue = 1 | pages = 41–5 | date = March 2005 | pmid = 15865209 | doi = 10.1007/s11033-004-4250-4 | s2cid = 43848098 }} It activates the T cells of the immune system and can be blocked by drugs. Calcineurin activates nuclear factor of activated T cell cytoplasmic (NFATc), a transcription factor, by dephosphorylating it. The activated NFATc is then translocated into the nucleus, where it upregulates the expression of interleukin 2 (IL-2), which, in turn, stimulates the growth and differentiation of the T cell response. Calcineurin is the target of a class of drugs called calcineurin inhibitors, which include ciclosporin, voclosporin, pimecrolimus and tacrolimus.

Structure

Calcineurin is a heterodimer of a 61-kD calmodulin-binding catalytic subunit, calcineurin A and a 19-kD Ca2+-binding regulatory subunit, calcineurin B. There are three isozymes of the catalytic subunit, each encoded by a separate gene (PPP3CA, PPP3CB, and PPP3CC) and two isoforms of the regulatory, also encoded by separate genes (PPP3R1, PPP3R2).

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|{{Infobox protein

| Name = protein phosphatase 3, catalytic subunit, alpha isozyme

| caption =

| image =

| width =

| HGNCid = 9314

| Symbol = PPP3CA

| AltSymbols = CALN, CALNA

| EntrezGene = 5530

| OMIM = 114105

| RefSeq = NM_000944

| UniProt = Q08209

| PDB =

| ECnumber = 3.1.3.16

| Chromosome = 4

| Arm = q

| Band = 24

| LocusSupplementaryData =

}}

|{{Infobox protein

| Name = protein phosphatase 3, catalytic subunit, beta isozyme

| caption =

| image =

| width =

| HGNCid = 9315

| Symbol = PPP3CB

| AltSymbols = CALNB

| EntrezGene = 5532

| OMIM = 114106

| RefSeq = NM_021132

| UniProt = P16298

| PDB =

| ECnumber = 3.1.3.16

| Chromosome = 10

| Arm = q

| Band = 22.2

| LocusSupplementaryData =

}}

|{{Infobox protein

| Name = protein phosphatase 3, catalytic subunit, gamma isozyme

| caption =

| image =

| width =

| HGNCid = 9316

| Symbol = PPP3CC

| AltSymbols =

| EntrezGene = 5533

| OMIM = 114107

| RefSeq = NM_005605

| UniProt = P48454

| PDB =

| ECnumber = 3.1.3.16

| Chromosome = 8

| Arm = p

| Band = 21.3

| LocusSupplementaryData =

}}

valign="top"

|{{Infobox protein

| Name = protein phosphatase 3, regulatory subunit B, alpha

| caption =

| image =

| width =

| HGNCid = 9317

| Symbol = PPP3R1

| AltSymbols =

| EntrezGene = 5534

| OMIM = 601302

| RefSeq = NM_000945

| UniProt = P63098

| PDB =

| ECnumber = 3.1.3.16

| Chromosome = 2

| Arm = p

| Band = 14

| LocusSupplementaryData =

}}

|{{Infobox protein

| Name = protein phosphatase 3, regulatory subunit B, beta

| caption =

| image =

| width =

| HGNCid = 9318

| Symbol = PPP3R2

| AltSymbols =

| EntrezGene = 5535

| OMIM = 613821

| RefSeq = NM_147180

| UniProt = Q96LZ3

| PDB =

| ECnumber = 3.1.3.16

| Chromosome = 9

| Arm = q

| Band = 31

| LocusSupplementaryData =

}}

Mechanism of action

When an antigen-presenting cell interacts with a T cell receptor on T cells, there is an increase in the cytoplasmic level of calcium, which activates calcineurin by binding a regulatory subunit and activating calmodulin binding.{{cite journal | vauthors = Yamashita M, Katsumata M, Iwashima M, Kimura M, Shimizu C, Kamata T, Shin T, Seki N, Suzuki S, Taniguchi M, Nakayama T | title = T cell receptor-induced calcineurin activation regulates T helper type 2 cell development by modifying the interleukin 4 receptor signaling complex | journal = J. Exp. Med. | volume = 191 | issue = 11 | pages = 1869–79 | date = June 2000 | pmid = 10839803 | pmc = 2213529 | doi = 10.1084/jem.191.11.1869 }} Calcineurin induces transcription factors (NFATs) that are important in the transcription of IL-2 genes. IL-2 activates T-helper lymphocytes and induces the production of other cytokines. In this way, it governs the action of cytotoxic lymphocytes. The amount of IL-2 being produced by the T-helper cells is believed to influence the extent of the immune response significantly.

Clinical relevance

= Rheumatic diseases =

Calcineurin inhibitors are prescribed for adult rheumatoid arthritis (RA) as a single drug or in combination with methotrexate. The microemulsion formulation is approved by the U.S. Food and Drug Administration for treatment of severely active RA. It is also prescribed for: psoriatic arthritis, psoriasis, acute ocular Behçet's disease, juvenile idiopathic arthritis, adult and juvenile polymyositis and dermatomyositis, adult and juvenile systemic lupus erythematosus, adult lupus membranous nephritis, systemic sclerosis, aplastic anemia, steroid-resistant nephrotic syndrome, atopic dermatitis, severe corticosteroid-dependent asthma, severe ulcerative colitis, pemphigus vulgaris, myasthenia gravis, and dry eye disease, with or without Sjögren's syndrome (administered as ophthalmic emulsion).{{Cite web|url = http://www.uptodate.com/contents/pharmacology-and-side-effects-of-cyclosporine-and-tacrolimus|title = Pharmacology and side effects of cyclosporine and tacrolimus|date = 2014-04-10|website = UpToDate}}

= Schizophrenia =

Calcineurin is linked to receptors for several brain chemicals including glutamate, dopamine and GABA.{{cite journal | vauthors = Bannai H, Lévi S, Schweizer C, Inoue T, Launey T, Racine V, Sibarita JB, Mikoshiba K, Triller A | title = Activity-dependent tuning of inhibitory neurotransmission based on GABAAR diffusion dynamics | journal = Neuron | volume = 62 | issue = 5 | pages = 670–82 | year = 2009 | pmid = 19524526 | doi = 10.1016/j.neuron.2009.04.023 | s2cid = 18512241 | doi-access = free }} An experiment with genetically-altered mice that could not produce calcineurin showed similar symptoms as in humans with schizophrenia: impairment in working memory, attention deficits, aberrant social behavior, and several other abnormalities characteristic of schizophrenia.{{cite journal | vauthors = Miyakawa T, Leiter LM, Gerber DJ, Gainetdinov RR, Sotnikova TD, Zeng H, Caron MG, Tonegawa S | title = Conditional calcineurin knockout mice exhibit multiple abnormal behaviors related to schizophrenia | journal = Proc. Natl. Acad. Sci. U.S.A. | volume = 100 | issue = 15 | pages = 8987–92 | date = July 2003 | pmid = 12851457 | pmc = 166425 | doi = 10.1073/pnas.1432926100 | bibcode = 2003PNAS..100.8987M | doi-access = free }}

= Diabetes =

Calcineurin along with NFAT, may improve the function of diabetics' pancreatic beta cells.{{cite journal | vauthors = Heit JJ, Apelqvist AA, Gu X, Winslow MM, Neilson JR, Crabtree GR, Kim SK | title = Calcineurin/NFAT signalling regulates pancreatic beta-cell growth and function | journal = Nature | volume = 443 | issue = 7109 | pages = 345–9 | date = September 2006 | pmid = 16988714 | doi = 10.1038/nature05097 | bibcode = 2006Natur.443..345H | s2cid = 4397036 }}{{cite journal | vauthors = Heit JJ | title = Calcineurin/NFAT signaling in the beta-cell: From diabetes to new therapeutics | journal = BioEssays | volume = 29 | issue = 10 | pages = 1011–21 | date = October 2007 | pmid = 17876792 | doi = 10.1002/bies.20644 | s2cid = 21027866 }} Thus tacrolimus contributes to the frequent development of new diabetes following renal transplantation.{{cite journal | vauthors = Crutchlow MF, Bloom RD | title = Transplant-associated hyperglycemia: a new look at an old problem | journal = Clin J Am Soc Nephrol | volume = 2 | issue = 2 | pages = 343–55 | year = 2007 | pmid = 17699434 | doi = 10.2215/CJN.03671106 | doi-access = free }}

Calcineurin/NFAT signaling is required for perinatal lung maturation and function.{{cite journal | vauthors = Davé V, Childs T, Xu Y, Ikegami M, Besnard V, Maeda Y, Wert SE, Neilson JR, Crabtree GR, Whitsett JA | title = Calcineurin/Nfat signaling is required for perinatal lung maturation and function | journal = J. Clin. Invest. | volume = 116 | issue = 10 | pages = 2597–609 | date = October 2006 | pmid = 16998587 | pmc = 1570374 | doi = 10.1172/JCI27331 }}

= Organ transplantation =

Calcineurin inhibitors such as tacrolimus and ciclosporin are used to suppress the immune system in organ allotransplant recipients to prevent rejection of the transplanted tissue.{{Cite web|url=https://www.nzf.org.nz/nzf_4754|title=Tacrolimus|date=1 March 2019|website=New Zealand Formulary v81}}

Interactions

Calcineurin has been shown to interact with RCAN1{{cite journal | vauthors = Fuentes JJ, Genescà L, Kingsbury TJ, Cunningham KW, Pérez-Riba M, Estivill X, de la Luna S | title = DSCR1, overexpressed in Down syndrome, is an inhibitor of calcineurin-mediated signaling pathways | journal = Hum. Mol. Genet. | volume = 9 | issue = 11 | pages = 1681–90 | date = July 2000 | pmid = 10861295 | doi = 10.1093/hmg/9.11.1681 | doi-access = free }} and AKAP5.{{cite journal | vauthors = Kashishian A, Howard M, Loh C, Gallatin WM, Hoekstra MF, Lai Y | title = AKAP79 inhibits calcineurin through a site distinct from the immunophilin-binding region | journal = J. Biol. Chem. | volume = 273 | issue = 42 | pages = 27412–9 | date = October 1998 | pmid = 9765270 | doi = 10.1074/jbc.273.42.27412 | doi-access = free }}

References

{{Reflist|35em}}

Further reading

{{Refbegin|35em}}

  • {{cite journal | vauthors = Cottrell JR, Levenson JM, Kim SH, Gibson HE, Richardson KA, Sivula M, Li B, Ashford CJ, Heindl KA, Babcock RJ, Rose DM, Hempel CM, Wiig KA, Laeng P, Levin ME, Ryan TA, Gerber DJ | title = Working memory impairment in calcineurin knock-out mice is associated with alterations in synaptic vesicle cycling and disruption of high-frequency synaptic and network activity in prefrontal cortex | journal = J. Neurosci. | volume = 33 | issue = 27 | pages = 10938–49 | date = July 2013 | pmid = 23825400 | doi = 10.1523/JNEUROSCI.5362-12.2013 | pmc=3718364}}
  • {{cite journal | vauthors = Crabtree GR | title = Generic signals and specific outcomes: signaling through Ca2+, calcineurin, and NF-AT | journal = Cell | volume = 96 | issue = 5 | pages = 611–4 | year = 1999 | pmid = 10089876 | doi = 10.1016/S0092-8674(00)80571-1 | s2cid = 8817053 | doi-access = free }}
  • {{cite journal | vauthors = Giri PR, Higuchi S, Kincaid RL | title = Chromosomal mapping of the human genes for the calmodulin-dependent protein phosphatase (calcineurin) catalytic subunit | journal = Biochem. Biophys. Res. Commun. | volume = 181 | issue = 1 | pages = 252–8 | year = 1991 | pmid = 1659808 | doi = 10.1016/S0006-291X(05)81410-X }}
  • {{cite journal | vauthors = Kincaid RL, Giri PR, Higuchi S, Tamura J, Dixon SC, Marietta CA, Amorese DA, Martin BM | title = Cloning and characterization of molecular isoforms of the catalytic subunit of calcineurin using nonisotopic methods | journal = J. Biol. Chem. | volume = 265 | issue = 19 | pages = 11312–9 | year = 1990 | doi = 10.1016/S0021-9258(19)38593-X | pmid = 2162844 | doi-access = free }}
  • {{cite journal | vauthors = Guerini D, Klee CB | title = Cloning of human calcineurin A: evidence for two isozymes and identification of a polyproline structural domain | journal = Proc. Natl. Acad. Sci. U.S.A. | volume = 86 | issue = 23 | pages = 9183–7 | year = 1989 | pmid = 2556704 | pmc = 298458 | doi = 10.1073/pnas.86.23.9183 | bibcode = 1989PNAS...86.9183G | doi-access = free }}
  • {{cite journal | vauthors = Kincaid RL, Nightingale MS, Martin BM | title = Characterization of a cDNA clone encoding the calmodulin-binding domain of mouse brain calcineurin | journal = Proc. Natl. Acad. Sci. U.S.A. | volume = 85 | issue = 23 | pages = 8983–7 | year = 1988 | pmid = 2848250 | pmc = 282646 | doi = 10.1073/pnas.85.23.8983 | bibcode = 1988PNAS...85.8983K | doi-access = free }}
  • {{cite journal | vauthors = Coghlan VM, Perrino BA, Howard M, Langeberg LK, Hicks JB, Gallatin WM, Scott JD | title = Association of protein kinase A and protein phosphatase 2B with a common anchoring protein | journal = Science | volume = 267 | issue = 5194 | pages = 108–11 | year = 1995 | pmid = 7528941 | doi = 10.1126/science.7528941 | bibcode = 1995Sci...267..108C }}
  • {{cite journal | vauthors = Griffith JP, Kim JL, Kim EE, Sintchak MD, Thomson JA, Fitzgibbon MJ, Fleming MA, Caron PR, Hsiao K, Navia MA | title = X-ray structure of calcineurin inhibited by the immunophilin-immunosuppressant FKBP12-FK506 complex | journal = Cell | volume = 82 | issue = 3 | pages = 507–22 | year = 1995 | pmid = 7543369 | doi = 10.1016/0092-8674(95)90439-5 | s2cid = 15502270 | doi-access = free }}
  • {{cite journal | vauthors = Shibasaki F, McKeon F | title = Calcineurin functions in Ca(2+)-activated cell death in mammalian cells | journal = J. Cell Biol. | volume = 131 | issue = 3 | pages = 735–43 | year = 1995 | pmid = 7593193 | pmc = 2120616 | doi = 10.1083/jcb.131.3.735 }}
  • {{cite journal | vauthors = Muramatsu T, Kincaid RL | title = Molecular cloning of a full-length cDNA encoding the catalytic subunit of human calmodulin-dependent protein phosphatase (calcineurin A alpha) | journal = Biochim. Biophys. Acta | volume = 1178 | issue = 1 | pages = 117–20 | year = 1993 | pmid = 8392375 | doi = 10.1016/0167-4889(93)90117-8 | url = https://zenodo.org/record/1258387 }}
  • {{cite journal | vauthors = Cameron AM, Steiner JP, Roskams AJ, Ali SM, Ronnett GV, Snyder SH | title = Calcineurin associated with the inositol 1,4,5-trisphosphate receptor-FKBP12 complex modulates Ca2+ flux | journal = Cell | volume = 83 | issue = 3 | pages = 463–72 | year = 1995 | pmid = 8521476 | doi = 10.1016/0092-8674(95)90124-8 | s2cid = 11594556 | doi-access = free }}
  • {{cite journal | vauthors = Kissinger CR, Parge HE, Knighton DR, Lewis CT, Pelletier LA, Tempczyk A, Kalish VJ, Tucker KD, Showalter RE, Moomaw EW | title = Crystal structures of human calcineurin and the human FKBP12-FK506-calcineurin complex | journal = Nature | volume = 378 | issue = 6557 | pages = 641–4 | year = 1995 | pmid = 8524402 | doi = 10.1038/378641a0 | bibcode = 1995Natur.378..641K | s2cid = 4337105 }}
  • {{cite journal | vauthors = Wang MG, Yi H, Guerini D, Klee CB, McBride OW | title = Calcineurin A alpha (PPP3CA), calcineurin A beta (PPP3CB) and calcineurin B (PPP3R1) are located on human chromosomes 4, 10q21-->q22 and 2p16-->p15 respectively | journal = Cytogenet. Cell Genet. | volume = 72 | issue = 2–3 | pages = 236–41 | year = 1996 | pmid = 8978785 | doi = 10.1159/000134198 | url = https://zenodo.org/record/1235418 }}
  • {{cite journal | vauthors = Shibasaki F, Kondo E, Akagi T, McKeon F | title = Suppression of signalling through transcription factor NF-AT by interactions between calcineurin and Bcl-2 | journal = Nature | volume = 386 | issue = 6626 | pages = 728–31 | year = 1997 | pmid = 9109491 | doi = 10.1038/386728a0 | bibcode = 1997Natur.386..728S | s2cid = 4277216 }}
  • {{cite journal | vauthors = Kashishian A, Howard M, Loh C, Gallatin WM, Hoekstra MF, Lai Y | title = AKAP79 inhibits calcineurin through a site distinct from the immunophilin-binding region | journal = J. Biol. Chem. | volume = 273 | issue = 42 | pages = 27412–9 | year = 1998 | pmid = 9765270 | doi = 10.1074/jbc.273.42.27412 | doi-access = free }}
  • {{cite journal | vauthors = Wang HG, Pathan N, Ethell IM, Krajewski S, Yamaguchi Y, Shibasaki F, McKeon F, Bobo T, Franke TF, Reed JC | title = Ca2+-induced apoptosis through calcineurin dephosphorylation of BAD | journal = Science | volume = 284 | issue = 5412 | pages = 339–43 | year = 1999 | pmid = 10195903 | doi = 10.1126/science.284.5412.339 | bibcode = 1999Sci...284..339W }}
  • {{cite journal | vauthors = Fuentes JJ, Genescà L, Kingsbury TJ, Cunningham KW, Pérez-Riba M, Estivill X, de la Luna S | title = DSCR1, overexpressed in Down syndrome, is an inhibitor of calcineurin-mediated signaling pathways | journal = Hum. Mol. Genet. | volume = 9 | issue = 11 | pages = 1681–90 | year = 2000 | pmid = 10861295 | doi = 10.1093/hmg/9.11.1681 | doi-access = free }}
  • {{cite journal | vauthors = Hartley JL, Temple GF, Brasch MA | title = DNA cloning using in vitro site-specific recombination | journal = Genome Res. | volume = 10 | issue = 11 | pages = 1788–95 | year = 2000 | pmid = 11076863 | pmc = 310948 | doi = 10.1101/gr.143000 }}
  • {{cite journal | vauthors = Frey N, Richardson JA, Olson EN | title = Calsarcins, a novel family of sarcomeric calcineurin-binding proteins | journal = Proc. Natl. Acad. Sci. U.S.A. | volume = 97 | issue = 26 | pages = 14632–7 | year = 2000 | pmid = 11114196 | pmc = 18970 | doi = 10.1073/pnas.260501097 | bibcode = 2000PNAS...9714632F | doi-access = free }}
  • {{cite journal | vauthors = Siddiq A, Miyazaki T, Takagishi Y, Kanou Y, Hayasaka S, Inouye M, Seo H, Murata Y | title = Expression of ZAKI-4 messenger ribonucleic acid in the brain during rat development and the effect of hypothyroidism | journal = Endocrinology | volume = 142 | issue = 5 | pages = 1752–9 | year = 2001 | pmid = 11316738 | doi = 10.1210/endo.142.5.8156 | doi-access = free }}

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