Caldimicrobium

{{Short description|Genus of bacteria}}

{{italic title}}

{{Taxobox

| color = lightgrey

| name = Caldimicrobium

| domain = Bacteria

| regnum = Pseudomonadati

| phylum = Desulfobacterota

| classis = Thermodesulfobacteria

| ordo = Thermodesulfobacteriales

| familia = Thermodesulfobacteriaceae

| genus = Caldimicrobium

| genus_authority = Miroshnichenko et al. 2009

| type_species = Caldimicrobium rimae

| type_species_authority =Miroshnichenko et al. 2009

| subdivision_ranks = Species

| subdivision =

| synonyms =

  • "Caldus"{{cite journal|title=Caldimicrobium|website=www.uniprot.org|url=https://www.uniprot.org/taxonomy/444090|language=en}}
  • "Thermosulfurisoma"

}}

File:Caldimicrobium_rimae.jpg

Caldimicrobium is a genus of bacteria from the family of Thermodesulfobacteriaceae.{{cite book|last1=Anitori|first1=Roberto Paul|title=Extremophiles: Microbiology and Biotechnology|date=2012|publisher=Horizon Scientific Press|isbn=9781904455981|language=en}}{{cite book|last1=Falkiewicz-Dulik|first1=Michalina|last2=Janda|first2=Katarzyna|last3=Wypych|first3=George|title=Handbook of Material Biodegradation, Biodeterioration, and Biostablization|date=2015|publisher=Elsevier|isbn=9781927885024|language=en}}{{cite journal|last1=Parker|first1=Charles Thomas|last2=Taylor|first2=Dorothea|last3=Garrity|first3=George M|editor1-first=Charles Thomas|editor1-last=Parker|editor2-first=George M|editor2-last=Garrity|title=Nomenclature Abstract for Caldimicrobium Miroshnichenko et al. 2009 emend. Kojima et al. 2016.|journal=The NamesforLife Abstracts|doi=10.1601/nm.14321|language=en|year=2009}}

Caldimicrobium is an anaerobic thermophile which is roughly 1.0–1.2 micrometers long and 0.5 micrometers wide.{{Cite journal|date=May 1, 2009|title=Caldimicrobium rimae gen. nov., sp. nov., an extremely thermophilic, facultatively lithoautotrophic, anaerobic bacterium from the Uzon Caldera, Kamchatka|journal= International Journal of Systematic and Evolutionary Microbiology|volume=59|pages=1040–1044|doi=10.1099/ijs.0.006072-0|last1=Miroshnichenko|first1=M. L.|last2=Lebedinsky|first2=A. V.|last3=Chernyh|first3=N. A.|last4=Tourova|first4=T. P.|last5=Kolganova|first5=T. V.|last6=Spring|first6=S.|last7=Bonch-Osmolovskaya|first7=E. A.|issue=5|pmid=19406789|doi-access=free}}

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN){{cite web |author=A.C. Parte |url=https://lpsn.dsmz.de/genus/caldimicrobium |title=Caldimicrobium |access-date=2025-02-28 |publisher=List of Prokaryotic names with Standing in Nomenclature (LPSN) |display-authors=et al.}} and National Center for Biotechnology Information (NCBI).{{cite web |author=C.L. Schoch |url=https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Tree&id=444090&lvl=3&lin=f&keep=1&srchmode=1&unlock |title=Caldimicrobium |access-date=2025-02-28 |publisher=National Center for Biotechnology Information (NCBI) taxonomy database |display-authors=et al.}}

class="wikitable"
colspan=1 | 16S rRNA based LTP_10_2024{{cite web |title=The LTP |url=https://imedea.uib-csic.es/mmg/ltp/#LTP| access-date=10 December 2024}}{{cite web |title=LTP_all tree in newick format |url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree |access-date=10 December 2024}}{{cite web |title=LTP_10_2024 Release Notes |url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf |access-date=10 December 2024}}

! colspan=1 | 120 marker proteins based GTDB 09-RS220{{cite web |title=GTDB release 09-RS220 |url=https://gtdb.ecogenomic.org/about#4%7C |website=Genome Taxonomy Database |access-date=10 May 2024}}{{cite web |title=bac120_r220.sp_labels |url=https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree |website=Genome Taxonomy Database |access-date=10 May 2024}}{{cite web |title=Taxon History |url=https://gtdb.ecogenomic.org/taxon_history/ |website=Genome Taxonomy Database |access-date=10 May 2024}}

style="vertical-align:top|

{{Clade | style=font-size:90%;line-height:80%

|label1=Thermodesulfobacteriaceae

|1={{clade

|1=Thermosulfurimonas

|2={{clade

|1=Caldimicrobium rimae Miroshnichenko et al. 2009

|2={{clade

|1=Caldimicrobium thiodismutans Kojima, Umezawa & Fukui 2016

|2=Thermodesulfobacterium

}}

}}

}}

}}

|

{{Clade | style=font-size:90%;line-height:80%

|label1=Thermodesulfobacteriaceae

|1={{clade

|1=Thermosulfurimonas

|2={{clade

|1=Caldimicrobium

|2=Thermodesulfobacterium

}}

}}

}}

See also

References

{{reflist}}

Further reading

  • {{cite journal |last1=Miroshnichenko |first1=ML |last2=Lebedinsky |first2=AV |last3=Chernyh |first3=NA |last4=Tourova |first4=TP |last5=Kolganova |first5=TV |last6=Spring |first6=S |last7=Bonch-Osmolovskaya |first7=EA|title=Caldimicrobium rimae gen. nov., sp. nov., an extremely thermophilic, facultatively lithoautotrophic, anaerobic bacterium from the Uzon Caldera, Kamchatka.|journal=International Journal of Systematic and Evolutionary Microbiology|date=May 2009 |volume=59 |issue=Pt 5 |pages=1040–4 |doi=10.1099/ijs.0.006072-0 |pmid=19406789 |doi-access=free}}
  • {{cite journal |last1=Kojima |first1=H |last2=Umezawa |first2=K |last3=Fukui |first3=M |title=Caldimicrobium thiodismutans sp. nov., a sulfur-disproportionating bacterium isolated from a hot spring, and emended description of the genus Caldimicrobium |journal=International Journal of Systematic and Evolutionary Microbiology |date=April 2016 |volume=66 |issue=4 |pages=1828–31 |doi=10.1099/ijsem.0.000947 |pmid=26842785 |hdl=2115/64925 |doi-access=free |hdl-access=free}}

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{{Bacteria classification}}

{{Taxonbar|from=Q26219533}}

Category:Thermodesulfobacteriota

Category:Bacteria genera

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