User:ProteinBoxBot/ASU 20080409D-6
Log file for [[User:ProteinBoxBot|Protein Box Bot]]
Log page index: User:ProteinBoxBot/PBB_Log_Index
Protein Status Quick Log - Date: 02:14, 10 April 2008 (UTC)
==Proteins with a High Potential Match (1)==
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| FRAS1 |
==Redirected Proteins (24)==
==Created (23)==
==Manual Inspection (Page not found) (1)==
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| FRAS1 |
==Updated (1)==
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| GEMIN7 |
Protein Status Grid - Date: 02:14, 10 April 2008 (UTC)
| class="wikitable sortable" |
| HUGO Symbol
! Action Summary ! Target page(s) ! WP Symbol Search |
|---|
| TSEN34
| Created | Location: TSEN34; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=TSEN34&fulltext=Search] |
| MOGAT2
| Created | Location: MOGAT2; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=MOGAT2&fulltext=Search] |
| GALNT14
| Created | Location: GALNT14; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=GALNT14&fulltext=Search] |
| BAT4
| Created | Location: BAT4; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=BAT4&fulltext=Search] |
| GPR177
| Created | Location: GPR177; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=GPR177&fulltext=Search] |
| EPS8L3
| Created | Location: EPS8L3; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=EPS8L3&fulltext=Search] |
| RIC3
| Created | Location: RIC3; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=RIC3&fulltext=Search] |
| RNF128
| Created | Location: RNF128; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=RNF128&fulltext=Search] |
| ULBP3
| Created | Location: ULBP3; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=ULBP3&fulltext=Search] |
| DSN1
| Created | Location: DSN1; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=DSN1&fulltext=Search] |
| RHBDF2
| Created | Location: RHBDF2; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=RHBDF2&fulltext=Search] |
| NOL12
| Created | Location: NOL12; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=NOL12&fulltext=Search] |
| FRAS1
| Manual Inspection (Page not found) | Other Pages: Fraser syndrome 1 (No Data); FRAS1 (Protein Template); DKFZp686I05113 (No Data); Dkfzp686i05113 (No Data); DKFZp686P08111 (No Data); Dkfzp686p08111 (No Data); FLJ14927 (No Data); Flj14927 (No Data); FLJ22031 (No Data); Flj22031 (No Data); KIAA1500 (No Data); Kiaa1500 (No Data); | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=FRAS1&fulltext=Search] |
| ASB13
| Created | Location: ASB13; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=ASB13&fulltext=Search] |
| LRRC8E
| Created | Location: LRRC8E; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=LRRC8E&fulltext=Search] |
| ARMET
| Created | Location: ARMET; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=ARMET&fulltext=Search] |
| DHDDS
| Created | Location: DHDDS; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=DHDDS&fulltext=Search] |
| OTUB2
| Created | Location: OTUB2; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=OTUB2&fulltext=Search] |
| C15orf29
| Created | Location: C15orf29; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=C15orf29&fulltext=Search] |
| FLJ12529
| Created | Location: FLJ12529; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=FLJ12529&fulltext=Search] |
| ASRGL1
| Created | Location: ASRGL1; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=ASRGL1&fulltext=Search] |
| C9orf82
| Created | Location: C9orf82; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=C9orf82&fulltext=Search] |
| GEMIN7
| Updated | Other Pages: Gem associated protein 7 (No Data); GEMIN7 (Redirect -> Gem-associated protein 7); SIP3 (No Data); Sip3 (No Data); Gem-associated protein 7 (Good Codes + Entrez Match); | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=GEMIN7&fulltext=Search] |
| IPO4
| Created | Location: IPO4; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=IPO4&fulltext=Search] |
| NOL9
| Created | Location: NOL9; | [http://en.wikipedia.org/wiki/Special:Search?ns0=1&search=NOL9&fulltext=Search] |
Vebose Log - Date: 02:14, 10 April 2008 (UTC)
=[[ARMET|ARMET]]=
=[[ASB13|ASB13]]=
=[[ASRGL1|ASRGL1]]=
=[[BAT4|BAT4]]=
=[[C15orf29|C15orf29]]=
=[[C9orf82|C9orf82]]=
=[[DHDDS|DHDDS]]=
=[[DSN1|DSN1]]=
=[[EPS8L3|EPS8L3]]=
- INFO: Beginning work on EPS8L3... {April 9, 2008 7:00:03 PM PDT}
- UPLOAD: Added new Image to wiki: Image:PBB_Protein_EPS8L3_image.jpg {April 9, 2008 7:00:30 PM PDT}
- REDIRECT: Protein Redirected to: EPS8L3 {April 9, 2008 7:00:37 PM PDT}
- CREATED: Created new protein page: EPS8L3 {April 9, 2008 7:00:43 PM PDT}
=[[FLJ12529|FLJ12529]]=
=[[FRAS1|FRAS1]]=
- INFO: Beginning work on FRAS1... {April 9, 2008 7:11:37 PM PDT}
- REDIRECT: Page directory gave bad page (FRAS1). Continuing with search.. Please correct entry: <80144,FRAS1>. {April 9, 2008 7:11:49 PM PDT}
- AMBIGUITY: Did not locate an acceptable page to update. {April 9, 2008 7:11:57 PM PDT}
<!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. --> {{PBB_Controls
| update_page = yes
| require_manual_inspection = no
| update_protein_box = yes
| update_summary = yes
| update_citations = yes
}}
<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot. See Template:PBB_Controls to Stop updates. -->
{{GNF_Protein_box
| image =
| image_source =
| PDB =
| Name = Fraser syndrome 1
| HGNCid = 19185
| Symbol = FRAS1
| AltSymbols =; DKFZp686I05113; DKFZp686P08111; FLJ14927; FLJ22031; KIAA1500
| OMIM = 607830
| ECnumber =
| Homologene = 23516
| MGIid = 2385368
| Function = {{GNF_GO|id=GO:0005509 |text = calcium ion binding}}{{GNF_GO|id=GO:0005515 |text = protein binding}}
| Component = {{GNF_GO|id=GO:0005604 |text = basement membrane}} {{GNF_GO|id=GO:0016020 |text = membrane}} {{GNF_GO|id=GO:0016021 |text = integral to membrane}}
| Process = {{GNF_GO|id=GO:0002009 |text = morphogenesis of an epithelium}} {{GNF_GO|id=GO:0007154 |text = cell communication}} {{GNF_GO|id=GO:0007156 |text = homophilic cell adhesion}}
| Orthologs = {{GNF_Ortholog_box
| Hs_EntrezGene = 80144
| Hs_Ensembl = ENSG00000138759
| Hs_RefseqProtein = NP_079350
| Hs_RefseqmRNA = NM_025074
| Hs_GenLoc_db =
| Hs_GenLoc_chr = 4
| Hs_GenLoc_start = 79198158
| Hs_GenLoc_end = 79684446
| Hs_Uniprot = Q86XX4
| Mm_EntrezGene = 231470
| Mm_Ensembl = ENSMUSG00000034687
| Mm_RefseqmRNA = NM_175473
| Mm_RefseqProtein = NP_780682
| Mm_GenLoc_db =
| Mm_GenLoc_chr = 5
| Mm_GenLoc_start = 96614257
| Mm_GenLoc_end = 97025030
| Mm_Uniprot = Q8BPP7
}}
}}
Fraser syndrome 1, also known as FRAS1, is a human gene.<ref name="entrez">{{cite web | title = Entrez Gene: FRAS1 Fraser syndrome 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=80144| accessdate = }}</ref>
<!-- The PBB_Summary template is automatically maintained by Protein Box Bot. See Template:PBB_Controls to Stop updates. -->
{{PBB_Summary
| section_title =
| summary_text = The FRAS1 gene encodes a putative extracellular matrix (ECM) protein and is mutated in Fraser syndrome (MIM 219000) (McGregor et al., 2003).[supplied by OMIM]<ref name="entrez">{{cite web | title = Entrez Gene: FRAS1 Fraser syndrome 1| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=80144| accessdate = }}</ref>
}}
References
{{reflist}}
Further reading
{{refbegin | 2}}
{{PBB_Further_reading
| citations =
- {{cite journal | author=Short K, Wiradjaja F, Smyth I |title=Let's stick together: the role of the Fras1 and Frem proteins in epidermal adhesion. |journal=IUBMB Life |volume=59 |issue= 7 |pages= 427-35 |year= 2007 |pmid= 17654118 |doi= 10.1080/15216540701510581 }}
- {{cite journal | author=Gattuso J, Patton MA, Baraitser M |title=The clinical spectrum of the Fraser syndrome: report of three new cases and review. |journal=J. Med. Genet. |volume=24 |issue= 9 |pages= 549-55 |year= 1987 |pmid= 3118036 |doi= }}
- {{cite journal | author=Long J, Wei Z, Feng W, et al. |title=Supramodular nature of GRIP1 revealed by the structure of its PDZ12 tandem in complex with the carboxyl tail of Fras1. |journal=J. Mol. Biol. |volume=375 |issue= 5 |pages= 1457-68 |year= 2008 |pmid= 18155042 |doi= 10.1016/j.jmb.2007.11.088 }}
- {{cite journal | author=Gerhard DS, Wagner L, Feingold EA, et al. |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
- {{cite journal | author=Takamiya K, Kostourou V, Adams S, et al. |title=A direct functional link between the multi-PDZ domain protein GRIP1 and the Fraser syndrome protein Fras1. |journal=Nat. Genet. |volume=36 |issue= 2 |pages= 172-7 |year= 2004 |pmid= 14730302 |doi= 10.1038/ng1292 }}
- {{cite journal | author=Ota T, Suzuki Y, Nishikawa T, et al. |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40-5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
- {{cite journal | author=Vrontou S, Petrou P, Meyer BI, et al. |title=Fras1 deficiency results in cryptophthalmos, renal agenesis and blebbed phenotype in mice. |journal=Nat. Genet. |volume=34 |issue= 2 |pages= 209-14 |year= 2003 |pmid= 12766770 |doi= 10.1038/ng1168 }}
- {{cite journal | author=McGregor L, Makela V, Darling SM, et al. |title=Fraser syndrome and mouse blebbed phenotype caused by mutations in FRAS1/Fras1 encoding a putative extracellular matrix protein. |journal=Nat. Genet. |volume=34 |issue= 2 |pages= 203-8 |year= 2003 |pmid= 12766769 |doi= 10.1038/ng1142 }}
- {{cite journal | author=Strausberg RL, Feingold EA, Grouse LH, et al. |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
- {{cite journal | author=Nagase T, Kikuno R, Ishikawa K, et al. |title=Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. |journal=DNA Res. |volume=7 |issue= 2 |pages= 143-50 |year= 2000 |pmid= 10819331 |doi= }}
}}
{{refend}}
{{protein-stub}}
=[[GALNT14|GALNT14]]=
=[[GEMIN7|GEMIN7]]=
- INFO: Beginning work on GEMIN7... {April 9, 2008 7:05:52 PM PDT}
- REDIRECT: Page directory gave bad page (GEMIN7). Continuing with search.. Please correct entry: <79760,GEMIN7>. {April 9, 2008 7:06:38 PM PDT}
- SEARCH REDIRECT: Control Box Found: Gem-associated protein 7 {April 9, 2008 7:06:41 PM PDT}
- UPDATE PROTEIN BOX: Updating Protein Box, No errors. {April 9, 2008 7:06:43 PM PDT}
- UPDATE SUMMARY: Updating Summary, No Errors. {April 9, 2008 7:06:43 PM PDT}
- UPDATE CITATIONS: Updating Citations, No Errors. {April 9, 2008 7:06:43 PM PDT}
- UPDATED: Updated protein page: Gem-associated protein 7 {April 9, 2008 7:06:46 PM PDT}
=[[GPR177|GPR177]]=
=[[IPO4|IPO4]]=
=[[LRRC8E|LRRC8E]]=
=[[MOGAT2|MOGAT2]]=
=[[NOL12|NOL12]]=
=[[NOL9|NOL9]]=
=[[OTUB2|OTUB2]]=
- INFO: Beginning work on OTUB2... {April 9, 2008 6:57:43 PM PDT}
- UPLOAD: Added new Image to wiki: Image:PBB_Protein_OTUB2_image.jpg {April 9, 2008 6:58:15 PM PDT}
- REDIRECT: Protein Redirected to: OTUB2 {April 9, 2008 6:58:22 PM PDT}
- CREATED: Created new protein page: OTUB2 {April 9, 2008 6:58:38 PM PDT}
=[[RHBDF2|RHBDF2]]=
=[[RIC3|RIC3]]=
=[[RNF128|RNF128]]=
=[[TSEN34|TSEN34]]=
=[[ULBP3|ULBP3]]=
- INFO: Beginning work on ULBP3... {April 9, 2008 6:59:40 PM PDT}
- UPLOAD: Added new Image to wiki: Image:PBB_Protein_ULBP3_image.jpg {April 9, 2008 6:59:52 PM PDT}
- REDIRECT: Protein Redirected to: ULBP3 {April 9, 2008 6:59:59 PM PDT}
- CREATED: Created new protein page: ULBP3 {April 9, 2008 7:00:03 PM PDT}
end log.