list of sequenced plant genomes

|Bryophytes

|Aquatic moss

|385.2 Mbp

|16,538

|BGI

|2020{{Cite journal |vauthors=Yu J, Li L, Wang S, Dong S, Chen Z, Patel N, Goffinet B, Liu H, Liu Y |title=Draft genome of the aquatic moss Fontinalis antipyretica (Fontinalaceae, Bryophyta) |journal=Gigabyte |year=2020 |volume=2020 |pages=1–9 |language=en |doi=10.46471/gigabyte.8 |pmid=36824590 |pmc=9631980 |doi-access=free}}

|BGISEQ-500 & 10X, scaffold N50 45.8 Kbp

|Bryophytes

|Early diverging land plant

|225.8 Mb

|19,138

|

|2017{{cite journal |vauthors=Bowman JL, Kohchi T, Yamato KT, Jenkins J, Shu S, Ishizaki K, Yamaoka S, Nishihama R, Nakamura Y, Berger F, Adam C, Aki SS, Althoff F, Araki T, Arteaga-Vazquez MA, Balasubrmanian S, Barry K, Bauer D, Boehm CR, Briginshaw L, Caballero-Perez J, Catarino B, Chen F, Chiyoda S, Chovatia M, Davies KM, Delmans M, Demura T, Dierschke T, Dolan L, Dorantes-Acosta AE, Eklund DM, Florent SN, Flores-Sandoval E, Fujiyama A, Fukuzawa H, Galik B, Grimanelli D, Grimwood J, Grossniklaus U, Hamada T, Haseloff J, Hetherington AJ, Higo A, Hirakawa Y, Hundley HN, Ikeda Y, Inoue K, Inoue SI, Ishida S, Jia Q, Kakita M, Kanazawa T, Kawai Y, Kawashima T, Kennedy M, Kinose K, Kinoshita T, Kohara Y, Koide E, Komatsu K, Kopischke S, Kubo M, Kyozuka J, Lagercrantz U, Lin SS, Lindquist E, Lipzen AM, Lu CW, De Luna E, Martienssen RA, Minamino N, Mizutani M, Mizutani M, Mochizuki N, Monte I, Mosher R, Nagasaki H, Nakagami H, Naramoto S, Nishitani K, Ohtani M, Okamoto T, Okumura M, Phillips J, Pollak B, Reinders A, Rövekamp M, Sano R, Sawa S, Schmid MW, Shirakawa M, Solano R, Spunde A, Suetsugu N, Sugano S, Sugiyama A, Sun R, Suzuki Y, Takenaka M, Takezawa D, Tomogane H, Tsuzuki M, Ueda T, Umeda M, Ward JM, Watanabe Y, Yazaki K, Yokoyama R, Yoshitake Y, Yotsui I, Zachgo S, Schmutz J |title=Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome |journal=Cell |volume=171 |issue=2 |pages=287–304.e15 |date=October 2017 |pmid=28985561 |doi=10.1016/j.cell.2017.09.030 |doi-access=free |hdl=21.11116/0000-0000-371C-4 |hdl-access=free}}

|Bryophytes

|Ubiquitous moss species

|318 Mbp

|15,992

|

|2019{{cite journal |vauthors=Pederson ER, Warshan D, Rasmussen U |title=Genome Sequencing of Pleurozium schreberi: The Assembled and Annotated Draft Genome of a Pleurocarpous Feather Moss |journal=G3 |volume=9 |issue=9 |pages=2791–2797 |date=September 2019 |pmid=31285273 |pmc=6723128 |doi=10.1534/g3.119.400279}}

|Bryophytes

|Ubiquitous moss species

|413.1 Mbp

|

|

|2024{{cite journal |last1=Bell |first1=David |last2=Long |first2=David |title=The genome sequence of the tree-moss, Climacium dendroides (Hedw.) F.Weber & D.Mohr (Climaciaceae) |journal=Wellcome Open Research |date=2024 |volume=9 |page=311 |doi=10.12688/wellcomeopenres.22450.1 |doi-access=free |pmc=11503002 }}

|

|Lycopodiophyta

|First aquatic Quillwort

|2.131 GB

|57,303

|

|2023{{cite journal | vauthors = Cui J, Zhu Y, Du H, Liu Z, Shen S, Wang T, Cui W, Zhang R, Jiang S, Wu Y, Gu X, Yu H, Liang Z | title = Chromosome-level reference genome of tetraploid Isoetes sinensis provides insights into evolution and adaption of lycophytes | journal = GigaScience | volume = 12 | date = December 2022 | pmid = 37776367 | pmc = 10541799 | doi = 10.1093/gigascience/giad079 }}

|Scaffold N50 = 86 Mb

|Lycopodiophyta

|Desiccation tolerance

|122 Mb

|27,204

|

|2018{{cite journal |vauthors=VanBuren R, Wai CM, Ou S, Pardo J, Bryant D, Jiang N, Mockler TC, Edger P, Michael TP |title=Extreme haplotype variation in the desiccation-tolerant clubmoss Selaginella lepidophylla |journal=Nature Communications |volume=9 |issue=1 |pages=13 |date=January 2018 |pmid=29296019 |pmc=5750206 |doi=10.1038/s41467-017-02546-5 |bibcode=2018NatCo...9...13V}}

|contig N50 = 163 kb

| Fern

|

|Polypodiophyta

|Fern

|0.26 Gb

|19,914

|

|2018

|

|Polypodiophyta

|Model organism

|7.5 Gb

|36,857

|

|2019 (v1.1),{{cite journal |vauthors=Marchant DB, Sessa EB, Wolf PG, Heo K, Barbazuk WB, Soltis PS, Soltis DE |title=The C-Fern (Ceratopteris richardii) genome: insights into plant genome evolution with the first partial homosporous fern genome assembly |journal=Scientific Reports |volume=9 |issue=1 |pages=18181 |date=December 2019 |pmid=31796775 |pmc=6890710 |doi=10.1038/s41598-019-53968-8 |bibcode=2019NatSR...918181M}} 2021 (v2.1){{Cite web |title=Phytozome v13 |url=https://phytozome-next.jgi.doe.gov/info/Crichardii_v2_1 |access-date=2021-10-15 |website=phytozome-next.jgi.doe.gov}}

|Partial assembly consisting of 7.5 Gb/11.2 Gb, arranged in 39 chromosomes

|Polypodiophyta

|Tree Fern

|6.23 Gb

|67,831

|

|2022

:{{cite journal |vauthors=Qiao X, Zhang S, Paterson AH |title=Pervasive genome duplications across the plant tree of life and their links to major evolutionary innovations and transitions |journal=Computational and Structural Biotechnology Journal |volume=20 |pages=3248–3256 |year=2022 |pmid=35782740 |pmc=9237934 |doi=10.1016/j.csbj.2022.06.026 |publisher=Elsevier BV |s2cid=249722160}}

:

:{{cite journal |vauthors=Stull GW, Pham KK, Soltis PS, Soltis DE |title=Deep reticulation: the long legacy of hybridization in vascular plant evolution |journal=The Plant Journal |volume=114 |issue=4 |pages=743–766 |date=May 2023 |pmid=36775995 |doi=10.1111/tpj.16142 |publisher=John Wiley & Sons Ltd |s2cid=253124732 |doi-access=free}}

:

:These reviews cite this research.

:

:{{cite journal |vauthors=Huang X, Wang W, Gong T, Wickell D, Kuo LY, Zhang X, Wen J, Kim H, Lu F, Zhao H, Chen S, Li H, Wu W, Yu C, Chen S, Fan W, Chen S, Bao X, Li L, Zhang D, Jiang L, Yan X, Liao Z, Zhou G, Guo Y, Ralph J, Sederoff RR, Wei H, Zhu P, Li FW, Ming R, Li Q |title=The flying spider-monkey tree fern genome provides insights into fern evolution and arborescence |journal=Nature Plants |volume=8 |issue=5 |pages=500–512 |date=May 2022 |pmid=35534720 |pmc=9122828 |doi=10.1038/s41477-022-01146-6 |s2cid=248668428 |doi-access=free|bibcode=2022NatPl...8..500H }}

|

|Cycadophyta

|Rare and vulnerable species of cycad

|10.5 Gb

|

|

|

|2022{{cite journal |vauthors=Liu Y, Wang S, Li L, Yang T, Dong S, Wei T, Wu S, Liu Y, Gong Y, Feng X, Ma J, Chang G, Huang J, Yang Y, Wang H, Liu M, Xu Y, Liang H, Yu J, Cai Y, Zhang Z, Fan Y, Mu W, Sahu SK, Liu S, Lang X, Yang L, Li N, Habib S, Yang Y, Lindstrom AJ, Liang P, Goffinet B, Zaman S, Wegrzyn JL, Li D, Liu J, Cui J, Sonnenschein EC, Wang X, Ruan J, Xue JY, Shao ZQ, Song C, Fan G, Li Z, Zhang L, Liu J, Liu ZJ, Jiao Y, Wang XQ, Wu H, Wang E, Lisby M, Yang H, Wang J, Liu X, Xu X, Li N, Soltis PS, Van de Peer Y, Soltis DE, Gong X, Liu H, Zhang S |title=The Cycas genome and the early evolution of seed plants |journal=Nature Plants |volume=8 |issue=4 |pages=389–401 |date=April 2022 |pmid=35437001 |doi=10.1038/s41477-022-01129-7 |pmc=9023351 |s2cid=248241496 |doi-access=free|bibcode=2022NatPl...8..389L }}

|

|19.6 Gb

| 26,359{{cite journal |vauthors=Stevens KA, Wegrzyn JL, Zimin A, Puiu D, Crepeau M, Cardeno C, Paul R, Gonzalez-Ibeas D, Koriabine M, Holtz-Morris AE, Martínez-García PJ, Sezen UU, Marçais G, Jermstad K, McGuire PE, Loopstra CA, Davis JM, Eckert A, de Jong P, Yorke JA, Salzberg SL, Neale DB, Langley CH |title=Sequence of the Sugar Pine Megagenome |journal=Genetics |volume=204 |issue=4 |pages=1613–1626 |date=December 2016 |pmid=27794028 |pmc=5161289 |doi=10.1534/genetics.116.193227}}

|12

| 2013{{cite journal |vauthors=Nystedt B, Street NR, Wetterbom A, Zuccolo A, Lin YC, Scofield DG, Vezzi F, Delhomme N, Giacomello S, Alexeyenko A, Vicedomini R, Sahlin K, Sherwood E, Elfstrand M, Gramzow L, Holmberg K, Hällman J, Keech O, Klasson L, Koriabine M, Kucukoglu M, Käller M, Luthman J, Lysholm F, Niittylä T, Olson A, Rilakovic N, Ritland C, Rosselló JA, Sena J, Svensson T, Talavera-López C, Theißen G, Tuominen H, Vanneste K, Wu ZQ, Zhang B, Zerbe P, Arvestad L, Bhalerao R, Bohlmann J, Bousquet J, Garcia Gil R, Hvidsten TR, de Jong P, MacKay J, Morgante M, Ritland K, Sundberg B, Thompson SL, Van de Peer Y, Andersson B, Nilsson O, Ingvarsson PK, Lundeberg J, Jansson S |title=The Norway spruce genome sequence and conifer genome evolution |journal=Nature |volume=497 |issue=7451 |pages=579–84 |date=May 2013 |pmid=23698360 |doi=10.1038/nature12211 |bibcode=2013Natur.497..579N |doi-access=free |hdl=1854/LU-4110028 |hdl-access=free}}

|Pinales

|Timber, Pulp

|20.8 Gb

|14,462

|12

|Institutional Collaboration

|2013{{cite journal |vauthors=Birol I, Raymond A, Jackman SD, Pleasance S, Coope R, Taylor GA, Yuen MM, Keeling CI, Brand D, Vandervalk BP, Kirk H, Pandoh P, Moore RA, Zhao Y, Mungall AJ, Jaquish B, Yanchuk A, Ritland C, Boyle B, Bousquet J, Ritland K, Mackay J, Bohlmann J, Jones SJ |title=Assembling the 20 Gb white spruce (Picea glauca) genome from whole-genome shotgun sequencing data |journal=Bioinformatics |volume=29 |issue=12 |pages=1492–7 |date=June 2013 |pmid=23698863 |pmc=3673215 |doi=10.1093/bioinformatics/btt178}}{{cite journal |vauthors=Warren RL, Keeling CI, Yuen MM, Raymond A, Taylor GA, Vandervalk BP, Mohamadi H, Paulino D, Chiu R, Jackman SD, Robertson G, Yang C, Boyle B, Hoffmann M, Weigel D, Nelson DR, Ritland C, Isabel N, Jaquish B, Yanchuk A, Bousquet J, Jones SJ, MacKay J, Birol I, Bohlmann J |title=Improved white spruce (Picea glauca) genome assemblies and annotation of large gene families of conifer terpenoid and phenolic defense metabolism |journal=The Plant Journal |volume=83 |issue=2 |pages=189–212 |date=July 2015 |pmid=26017574 |doi=10.1111/tpj.12886 |s2cid=2642832 |doi-access=free}}

|

|Pinales

|Timber

|20.15 Gb

|9,024

|12

|

|2014{{cite journal |vauthors=Neale DB, Wegrzyn JL, Stevens KA, Zimin AV, Puiu D, Crepeau MW, Cardeno C, Koriabine M, Holtz-Morris AE, Liechty JD, Martínez-García PJ, Vasquez-Gross HA, Lin BY, Zieve JJ, Dougherty WM, Fuentes-Soriano S, Wu LS, Gilbert D, Marçais G, Roberts M, Holt C, Yandell M, Davis JM, Smith KE, Dean JF, Lorenz WW, Whetten RW, Sederoff R, Wheeler N, McGuire PE, Main D, Loopstra CA, Mockaitis K, deJong PJ, Yorke JA, Salzberg SL, Langley CH |title=Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies |journal=Genome Biology |volume=15 |issue=3 |pages=R59 |date=March 2014 |pmid=24647006 |pmc=4053751 |doi=10.1186/gb-2014-15-3-r59 |doi-access=free}}{{cite journal |vauthors=Zimin A, Stevens KA, Crepeau MW, Holtz-Morris A, Koriabine M, Marçais G, Puiu D, Roberts M, Wegrzyn JL, de Jong PJ, Neale DB, Salzberg SL, Yorke JA, Langley CH |title=Sequencing and assembly of the 22-gb loblolly pine genome |journal=Genetics |volume=196 |issue=3 |pages=875–90 |date=March 2014 |pmid=24653210 |pmc=3948813 |doi=10.1534/genetics.113.159715}}{{cite journal |vauthors=Wegrzyn JL, Liechty JD, Stevens KA, Wu LS, Loopstra CA, Vasquez-Gross HA, Dougherty WM, Lin BY, Zieve JJ, Martínez-García PJ, Holt C, Yandell M, Zimin AV, Yorke JA, Crepeau MW, Puiu D, Salzberg SL, Dejong PJ, Mockaitis K, Main D, Langley CH, Neale DB |title=Unique features of the loblolly pine (Pinus taeda L.) megagenome revealed through sequence annotation |journal=Genetics |volume=196 |issue=3 |pages=891–909 |date=March 2014 |pmid=24653211 |pmc=3948814 |doi=10.1534/genetics.113.159996}}

|N50 scaffold size: 66.9 kbp

|Pinales

|Timber; with the largest genomes among the pines;

the largest pine species

|31 Gb

|13,936

|12

|

|2016

|61.5X sequence coverage, platforms used:

Hiseq 2000, Hiseq 2500, GAIIx, MiSeq

|Ginkgoales

|

|11.75 Gb

|41,840

|

|

|2016{{cite journal |vauthors=Guan R, Zhao Y, Zhang H, Fan G, Liu X, Zhou W, Shi C, Wang J, Liu W, Liang X, Fu Y, Ma K, Zhao L, Zhang F, Lu Z, Lee SM, Xu X, Wang J, Yang H, Fu C, Ge S, Chen W |title=Draft genome of the living fossil Ginkgo biloba |journal=GigaScience |volume=5 |issue=1 |pages=49 |date=November 2016 |pmid=27871309 |pmc=5118899 |doi=10.1186/s13742-016-0154-1 |doi-access=free}}

|N50 scaffold size: 48.2 kbp

|Pinales

|

|16 Gb

|54,830

|13

|

|2017{{cite journal |vauthors=Neale DB, McGuire PE, Wheeler NC, Stevens KA, Crepeau MW, Cardeno C, Zimin AV, Puiu D, Pertea GM, Sezen UU, Casola C, Koralewski TE, Paul R, Gonzalez-Ibeas D, Zaman S, Cronn R, Yandell M, Holt C, Langley CH, Yorke JA, Salzberg SL, Wegrzyn JL |title=The Douglas-Fir Genome Sequence Reveals Specialization of the Photosynthetic Apparatus in Pinaceae |journal=G3 |volume=7 |issue=9 |pages=3157–3167 |date=September 2017 |pmid=28751502 |doi=10.1534/g3.117.300078 |pmc=5592940 |doi-access=free}}

|N50 scaffold size : 340.7 kbp

|Gnetales

|

|4.07 Gb

|27,491

|

|

|2018{{cite journal |vauthors=Wan T, Liu ZM, Li LF, Leitch AR, Leitch IJ, Lohaus R, Liu ZJ, Xin HP, Gong YB, Liu Y, Wang WC, Chen LY, Yang Y, Kelly LJ, Yang J, Huang JL, Li Z, Liu P, Zhang L, Liu HM, Wang H, Deng SH, Liu M, Li J, Ma L, Liu Y, Lei Y, Xu W, Wu LQ, Liu F, Ma Q, Yu XR, Jiang Z, Zhang GQ, Li SH, Li RQ, Zhang SZ, Wang QF, Van de Peer Y, Zhang JB, Wang XM |title=A genome for gnetophytes and early evolution of seed plants |journal=Nature Plants |volume=4 |issue=2 |pages=82–89 |date=February 2018 |pmid=29379155 |doi=10.1038/s41477-017-0097-2 |doi-access=free |bibcode=2018NatPl...4...82W |hdl=1854/LU-8558174 |hdl-access=free}}

|

|Pinales

|

|12.34 Gbp

|

|

|

|2019{{cite journal |vauthors=Kuzmin DA, Feranchuk SI, Sharov VV, Cybin AN, Makolov SV, Putintseva YA, Oreshkova NV, Krutovsky KV |title=Stepwise large genome assembly approach: a case of Siberian larch (Larix sibirica Ledeb) |journal=BMC Bioinformatics |volume=20 |issue=Suppl 1 |pages=37 |date=February 2019 |pmid=30717661 |pmc=6362582 |doi=10.1186/s12859-018-2570-y |doi-access=free}}

|scaffold N50 of 6440 bp

|Pinales

|

|18.16 Gb

|94,205

|

|

|2019{{cite journal |vauthors=Mosca E, Cruz F, Gómez-Garrido J, Bianco L, Rellstab C, Brodbeck S, Csilléry K, Fady B, Fladung M, Fussi B, Gömöry D, González-Martínez SC, Grivet D, Gut M, Hansen OK, Heer K, Kaya Z, Krutovsky KV, Kersten B, Liepelt S, Opgenoorth L, Sperisen C, Ullrich KK, Vendramin GG, Westergren M, Ziegenhagen B, Alioto T, Gugerli F, Heinze B, Höhn M, Troggio M, Neale DB |title=Abies alba Mill.): A Community-Generated Genomic Resource |journal=G3 |volume=9 |issue=7 |pages=2039–2049 |date=July 2019 |pmid=31217262 |doi=10.1534/g3.119.400083 |pmc=6643874 |doi-access=free}}

|scaffold N50 of 14,051 bp

[https://www.actg.science/ Alliance for Conservation Tree Genomics]

Biodiversity Genomics Team

| 2021{{cite journal |vauthors=Strijk JS, Hinsinger DD, Roeder MM, Chatrou LW, Couvreur TL, Erkens RH, Sauquet H, Pirie MD, Thomas DC, Cao K |title=Chromosome-level reference genome of the soursop (Annona muricata): A new resource for Magnoliid research and tropical pomology |journal=Molecular Ecology Resources |volume=21 |issue=5 |pages=1608–1619 |date=July 2021 |pmid=33569882 |pmc=8251617 |doi=10.1111/1755-0998.13353 |doi-access=free}}

|Salicaceae

|Seriously endangered relic species

|338.93 Mb

|33,229

|

|2022{{cite journal |vauthors=He X, Wang Y, Lian J, Zheng J, Zhou J, Li J, Jiao Z, Niu Y, Wang W, Zhang J, Wang B, Zhuge Q |title=The whole-genome assembly of an endangered Salicaceae species: Chosenia arbutifolia (Pall.) A. Skv |journal=GigaScience |volume=11 |date=November 2022 |pmid=36374197 |pmc=9661892 |doi=10.1093/gigascience/giac109}}

|Contig N50 of 1.68 Mb

|Lauraceae

|

|730.7 Mb

|

|

|2019{{cite journal |doi=10.1098/rspb.2019.0099 |title=Darwin review: Angiosperm phylogeny and evolutionary radiations |date=2019 |last1=Soltis |first1=Pamela S. |last2=Folk |first2=Ryan A. |last3=Soltis |first3=Douglas E. |journal=Proceedings of the Royal Society B: Biological Sciences |volume=286 |issue=1899 |pmc=6452062 }}

|

|Proteaceae

|Commercially grown nut

|745 Mb

|34,274

|

|2020{{cite journal |vauthors=Nock CJ, Baten A, Mauleon R, Langdon KS, Topp B, Hardner C, Furtado A, Henry RJ, King GJ |title=Chromosome-Scale Assembly and Annotation of the Macadamia Genome (Macadamia integrifolia HAES 741) |journal=G3 |volume=10 |issue=10 |pages=3497–3504 |date=October 2020 |pmid=32747341 |pmc=7534425 |doi=10.1534/g3.120.401326}}

|N50 413 kb

|Proteaceae

|Rare relative of macademia nut

|750 Mbp

|

|

|2020{{cite journal |vauthors=Murigneux V, Rai SK, Furtado A, Bruxner TJ, Tian W, Harliwong I, Wei H, Yang B, Ye Q, Anderson E, Mao Q, Drmanac R, Wang O, Peters BA, Xu M, Wu P, Topp B, Coin LJ, Henry RJ |title=Comparison of long-read methods for sequencing and assembly of a plant genome |journal=GigaScience |volume=9 |issue=12 |date=December 2020 |pmid=33347571 |pmc=7751402 |doi=10.1093/gigascience/giaa146}}

|Compared Nanopore, Illumina and BGI stLRF data

|

|35,328

|Guangxi University

| 2019{{cite journal |vauthors=Strijk JS, Hinsinger DD, Zhang F, Cao K |title=Trochodendron aralioides, the first chromosome-level draft genome in Trochodendrales and a valuable resource for basal eudicot research |journal=GigaScience |volume=8 |issue=11 |date=November 2019 |pmid=31738437 |pmc=6859433 |doi=10.1093/gigascience/giz136}}

|Chenopodiaceae

|Crop plant

|1.39–1.50 Gb

|44,776

|

|2017{{cite journal |vauthors=Jarvis DE, Ho YS, Lightfoot DJ, Schmöckel SM, Li B, Borm TJ, Ohyanagi H, Mineta K, Michell CT, Saber N, Kharbatia NM, Rupper RR, Sharp AR, Dally N, Boughton BA, Woo YH, Gao G, Schijlen EG, Guo X, Momin AA, Negrão S, Al-Babili S, Gehring C, Roessner U, Jung C, Murphy K, Arold ST, Gojobori T, Linden CG, van Loo EN, Jellen EN, Maughan PJ, Tester M |title=The genome of Chenopodium quinoa |journal=Nature |volume=542 |issue=7641 |pages=307–312 |date=February 2017 |pmid=28178233 |doi=10.1038/nature21370 |bibcode=2017Natur.542..307J |doi-access=free |hdl=10754/622874 |hdl-access=free}}

|3,486 scaffolds, scaffold N50 of 3.84 Mb, 90% of the assembled genome is contained in 439 scaffolds

|Amaranthaceae

|Crop plant

|403.9 Mb

|23,847

|

|2016{{cite journal |vauthors=Clouse JW, Adhikary D, Page JT, Ramaraj T, Deyholos MK, Udall JA, Fairbanks DJ, Jellen EN, Maughan PJ |title=The Amaranth Genome: Genome, Transcriptome, and Physical Map Assembly |journal=The Plant Genome |volume=9 |issue=1 |pages=0 |date=March 2016 |pmid=27898770 |doi=10.3835/plantgenome2015.07.0062 |doi-access=free}}

|16 large scaffolds from 16.9 to 38.1 Mb. N50 and L50 of the assembly was 24.4 Mb and 7, respectively.{{Cite web |url=https://phytozome.jgi.doe.gov/pz/portal.html#!info?alias=Org_Ahypochondriacus_er |title=Phytozome |website=phytozome.jgi.doe.gov |access-date=2017-06-21}}

|Cactaceae

|Wild plant

|1.40 Gb

|28,292

|

|2017{{cite journal |vauthors=Copetti D, Búrquez A, Bustamante E, ((Charboneau JLM)), Childs KL, Eguiarte LE, Lee S, Liu TL, McMahon MM, Whiteman NK, Wing RA, Wojciechowski MF, Sanderson MJ |title=Extensive gene tree discordance and hemiplasy shaped the genomes of North American columnar cacti |journal=Proc Natl Acad Sci U S A |volume=114 |issue=45 |pages=12003–12008 |date=November 2017 |pmid=29078296 |pmc=5692538 |doi=10.1073/pnas.1706367114 |bibcode=2017PNAS..11412003C |doi-access=free}}

|57,409 scaffolds, scaffold N50 of 61.5 kb

|Nepenthes

|Carnivorous Plant

|691 Mb

|42,961

|

|2023{{cite journal | vauthors = Gao Y, Liao HB, Liu TH, Wu JM, Wang ZF, Cao HL | title = Draft genome and transcriptome of Nepenthes mirabilis, a carnivorous plant in China | journal = BMC Genomic Data | volume = 24 | issue = 1 | pages = 21 | date = April 2023 | pmid = 37060047 | pmc = 10103442 | doi = 10.1186/s12863-023-01126-5 | doi-access = free }}

|159,555 contigs/scaffolds and N50 of 10,307 bp

|Amaranthaceae

|Performs complete C₄ photosynthesis within individual cells (SCC₄)

|467 Mb

|29,604

|ABLife Inc.

|2019{{cite journal |vauthors=Wang L, Ma G, Wang H, Cheng C, Mu S, Quan W, Jiang L, Zhao Z, Zhang Y, Zhang K, Wang X, Tian C, Zhang Y |title=A draft genome assembly of halophyte Suaeda aralocaspica, a plant that performs C4 photosynthesis within individual cells |journal=GigaScience |volume=8 |issue=9 |date=September 2019 |pmid=31513708 |pmc=6741815 |doi=10.1093/gigascience/giz116}}

|4,033 scaffolds, scaffold N50 length of 1.83 Mb

|Simmondsiaceae

|Oilseed Crop

|887 Mb

|23,490

|

|2020{{cite journal |vauthors=Sturtevant D, Lu S, Zhou ZW, Shen Y, Wang S, Song JM, Zhong J, Burks DJ, Yang ZQ, Yang QY, Cannon AE, Herrfurth C, Feussner I, Borisjuk L, Munz E, Verbeck GF, Wang X, Azad RK, Singleton B, Dyer JM, Chen LL, Chapman KD, Guo L |title=Simmondsia chinensis): A taxonomically isolated species that directs wax ester accumulation in its seeds |journal=Science Advances |volume=6 |issue=11 |pages=eaay3240 |date=March 2020 |pmid=32195345 |doi=10.1126/sciadv.aay3240 |doi-access=free |pmc=7065883}}

|994 scaffolds, scaffold N50 length of 5.2 Mb

|Droseraceae

|Carnivorous Plant

|263.79 Mb

|

|

|2016{{cite journal |vauthors=Butts C, Bierma J, Martin R |title=Novel proteases from the genome of the carnivorous plant Drosera capensis: structural prediction and comparative analysis |journal=Proteins |volume=84 |pages=1517–1533 |date=July 2016 |issue=10 |pmid=27353064 |doi=10.1002/prot.25095 |pmc=5026580}}

|12,713 scaffolds

|Tamaricaceae

|Margin tree

|1.32 Gb

|

|

|2023{{cite journal | vauthors = Liu JN, Fang H, Liang Q, Dong Y, Wang C, Yan L, Ma X, Zhou R, Lang X, Gai S, Wang L, Xu S, Yang KQ, Wu D | title = Genomic analyses provide insights into the evolution and salinity adaptation of halophyte Tamarix chinensis | journal = GigaScience | volume = 12 | date = December 2022 | pmid = 37494283 | pmc = 10370455 | doi = 10.1093/gigascience/giad053 }}

|

|Akaniaceae

|endangered relic tree species

|1.21 Gb

|45,839

|

|

|2022{{cite journal |vauthors=Zhang H, Du X, Dong C, Zheng Z, Mu W, Zhu M, Yang Y, Li X, Hu H, Shrestha N, Li M, Yang Y |title=Genomes and demographic histories of the endangered Bretschneidera sinensis (Akaniaceae) |journal=GigaScience |volume=11 |date=June 2022 |pmid=35701375 |pmc=9197684 |doi=10.1093/gigascience/giac050}}

|

(Marula)

|Anacardiaceae

|Used for food

|

|18,397

|

|

|2018{{cite journal | vauthors = Chang Y, Liu H, Liu M, Liao X, Sahu SK, Fu Y, Song B, Cheng S, Kariba R, Muthemba S, Hendre PS, Mayes S, Ho WK, Yssel AE, Kendabie P, Wang S, Li L, Muchugi A, Jamnadass R, Lu H, Peng S, Van Deynze A, Simons A, Yana-Shapiro H, Van de Peer Y, Xu X, Yang H, Wang J, Liu X | title = The draft genomes of five agriculturally important African orphan crops | journal = GigaScience | volume = 8 | issue = 3 | date = March 2019 | pmid = 30535374 | pmc = 6405277 | doi = 10.1093/gigascience/giy152 }}{{cite book |title=GigaDB Dataset |chapter=Genomic data of Marula (Sclerocarya birrea) |doi=10.5524/101057 |year=2018 |vauthors=Chang Y, Liu H, Liu M, Liao X, Sahu SK, Fu Y, Song B, Cheng S, Kariba R, Muthemba S, Hendre PS, Mayes S, Ho WK, Kendabie P, Wang S, Li L, Muchugi A, Jamnadass R, Lu H, Peng S, Deynze AV, Simons A, Yana-Shapiro H, Xu X, Yang H, Wang J, Liu X |publisher=GigaScience Database}}

|

|Begoniaceae

|Flower

|799.83 Mb

|

|

|

|2022{{cite journal | vauthors = Li L, Chen X, Fang D, Dong S, Guo X, Li N, Campos-Dominguez L, Wang W, Liu Y, Lang X, Peng Y, Tian D, Thomas DC, Mu W, Liu M, Wu C, Yang T, Zhang S, Yang L, Yang J, Liu ZJ, Zhang L, Zhang X, Chen F, Jiao Y, Guo Y, Hughes M, Wang W, Liu X, Zhong C, Li A, Sahu SK, Yang H, Wu E, Sharbrough J, Lisby M, Liu X, Xu X, Soltis DE, Van de Peer Y, Kidner C, Zhang S, Liu H | title = Genomes shed light on the evolution of Begonia, a mega-diverse genus | journal = The New Phytologist | volume = 234 | issue = 1 | pages = 295–310 | date = April 2022 | pmid = 34997964 | pmc = 7612470 | doi = 10.1111/nph.17949 | bibcode = 2022NewPh.234..295L }}

|

|Begoniaceae

|Flower

|331.75 Mb

|

|

|

|2022

|

|14

| University of Helsinki

|Betulaceae

|Pioneer hardwood tree species

|430 Mbp

|

|

|

|2021{{cite journal |vauthors=Chen S, Wang Y, Yu L, Zheng T, Wang S, Yue Z, Jiang J, Kumari S, Zheng C, Tang H, Li J, Li Y, Chen J, Zhang W, Kuang H, Robertson JS, Zhao PX, Li H, Shu S, Yordanov YS, Huang H, Goodstein DM, Gai Y, Qi Q, Min J, Xu C, Wang S, Qu GZ, Paterson AH, Sankoff D, Wei H, Liu G, Yang C |title=Genome sequence and evolution of Betula platyphylla |journal=Horticulture Research |volume=8 |issue=1 |pages=37 |date=February 2021 |pmid=33574224 |doi=10.1038/s41438-021-00481-7 |pmc=7878895 |doi-access=free|bibcode=2021HorR....8...37C }}

|contig N50 = 751 kbp

|Betulaceae

|Nut tree used for food

|370.75 Mbp

|27,591

|11

|

|2021{{cite journal |vauthors=Zhao T, Ma W, Yang Z, Liang L, Chen X, Wang G, Ma Q, Wang L |title=A chromosome-level reference genome of the hazelnut, Corylus heterophylla Fisch |journal=GigaScience |volume=10 |issue=4 |date=April 2021 |pmid=33871007 |pmc=8054262 |doi=10.1093/gigascience/giab027}}

|Nanopore/Hi-C chromosome scale. Contig N50 and scaffold N50 sizes of 2.07 and 31.33  Mb, respectively

|Betulaceae

|Hazel used for breeding

|367.67 Mb

|28,409

|11

|

|2021{{cite journal |vauthors=Li Y, Sun P, Lu Z, Chen J, Wang Z, Du X, Zheng Z, Wu Y, Hu H, Yang J, Ma J, Liu J, Yang Y |title=The Corylus mandshurica genome provides insights into the evolution of Betulaceae genomes and hazelnut breeding |journal=Horticulture Research |volume=8 |issue=1 |pages=54 |date=March 2021 |pmid=33642584 |doi=10.1038/s41438-021-00495-1 |pmc=7917096 |doi-access=free|bibcode=2021HorR....8...54L }}

|

|32,670

|8

|5

|AGI

| 2000{{cite journal |title=Analysis of the genome sequence of the flowering plant Arabidopsis thaliana |journal=Nature |volume=408 |issue=6814 |pages=796–815 |date=December 2000 |pmid=11130711 |doi=10.1038/35048692 |bibcode=2000Natur.408..796T |author=((The Arabidopsis Genome Initiative)) |doi-access=free}}

G-type

|Brassicaceae

|Model plant for specialised metabolites and plant defenses

|167.7 Mbp

|25,350

|8

|

|2017{{cite journal |vauthors=Byrne SL, Erthmann PØ, Agerbirk N, Bak S, Hauser TP, Nagy I, Paina C, Asp T |title=The genome sequence of Barbarea vulgaris facilitates the study of ecological biochemistry |journal=Scientific Reports |volume=7 |pages=40728 |date=January 2017 |pmid=28094805 |pmc=5240624 |doi=10.1038/srep40728 |bibcode=2017NatSR...740728B}}

|66.5 X coverage with Illumina GA II technology

|41,174 (has undergone genome triplication)

|10

|The Brassica rapa Genome Sequencing Project Consortium

| 2011{{cite journal |vauthors=Wang X, Wang H, Wang J, Sun R, Wu J, Liu S, Bai Y, Mun JH, Bancroft I, Cheng F, Huang S, Li X, Hua W, Wang J, Wang X, Freeling M, Pires JC, Paterson AH, Chalhoub B, Wang B, Hayward A, Sharpe AG, Park BS, Weisshaar B, Liu B, Li B, Liu B, Tong C, Song C, Duran C, Peng C, Geng C, Koh C, Lin C, Edwards D, Mu D, Shen D, Soumpourou E, Li F, Fraser F, Conant G, Lassalle G, King GJ, Bonnema G, Tang H, Wang H, Belcram H, Zhou H, Hirakawa H, Abe H, Guo H, Wang H, Jin H, Parkin IA, Batley J, Kim JS, Just J, Li J, Xu J, Deng J, Kim JA, Li J, Yu J, Meng J, Wang J, Min J, Poulain J, Wang J, Hatakeyama K, Wu K, Wang L, Fang L, Trick M, Links MG, Zhao M, Jin M, Ramchiary N, Drou N, Berkman PJ, Cai Q, Huang Q, Li R, Tabata S, Cheng S, Zhang S, Zhang S, Huang S, Sato S, Sun S, Kwon SJ, Choi SR, Lee TH, Fan W, Zhao X, Tan X, Xu X, Wang Y, Qiu Y, Yin Y, Li Y, Du Y, Liao Y, Lim Y, Narusaka Y, Wang Y, Wang Z, Li Z, Wang Z, Xiong Z, Zhang Z |title=The genome of the mesopolyploid crop species Brassica rapa |journal=Nature Genetics |volume=43 |issue=10 |pages=1035–9 |date=August 2011 |pmid=21873998 |doi=10.1038/ng.919 |s2cid=205358099 |url=https://nrc-publications.canada.ca/eng/view/accepted/?id=8fdc0510-af47-4bba-bdf8-7c81bd2b18ec}}

|

|Brassicaceae

|A model system for studies in evolution of plant development

|198 Mbp

|29,458

|8

|Max Planck Institute for Plant Breeding Research, Köln, Germany

|2016{{cite journal |vauthors=Gan X, Hay A, Kwantes M, Haberer G, Hallab A, Ioio RD, Hofhuis H, Pieper B, Cartolano M, Neumann U, Nikolov LA, Song B, Hajheidari M, Briskine R, Kougioumoutzi E, Vlad D, Broholm S, Hein J, Meksem K, Lightfoot D, Shimizu KK, Shimizu-Inatsugi R, Imprialou M, Kudrna D, Wing R, Sato S, Huijser P, Filatov D, Mayer KF, Mott R, Tsiantis M |title=The Cardamine hirsuta genome offers insight into the evolution of morphological diversity |journal=Nature Plants |volume=2 |issue=11 |pages=16167 |date=October 2016 |pmid=27797353 |doi=10.1038/nplants.2016.167 |pmc=8826541 |doi-access=free|bibcode=2016NatPl...216167G }}

|Shotgun sequencing strategy, combining paired end reads (197× assembled sequence coverage) and mate pair reads (66× assembled) from Illumina HiSeq (a total of 52 Gbp raw reads).

|Brassicaceae

|Used for food

|851 Mbp

|45,438

|

|University of Reading

|2020{{cite journal |vauthors=Bell L, Chadwick M, Puranik M, Tudor R, Methven L, Kennedy S, Wagstaff C |title=The Eruca sativa Genome and Transcriptome: A Targeted Analysis of Sulfur Metabolism and Glucosinolate Biosynthesis Pre and Postharvest |journal=Frontiers in Plant Science |volume=11 |pages=525102 |date=2020 |pmid=33193472 |pmc=7652772 |doi=10.3389/fpls.2020.525102 |doi-access=free}}

|Illumina MiSeq and HiSeq2500. PCR free paired end and long mate pair sequencing and assembly. Illumina HiSeq transcriptome sequencing (125/150 bp paired end reads).

|Brassicaceae

|Model plant for studying defensive chemistry, including cardiac glycosides

|175 Mbp

|29,947

|8

|Boyce Thompson Institute, Ithaca, NY

|2020{{Cite web |date=September 17, 2019 |title=Erysimum Genome Site |url=https://www.erysimum.org/ |website=www.erysimum.org}}{{cite journal |vauthors=Züst T, Strickler SR, Powell AF, Mabry ME, An H, Mirzaei M, York T, Holland CK, Kumar P, Erb M, Petschenka G, Gómez JM, Perfectti F, Müller C, Pires JC, Mueller LA, Jander G |title=Independent evolution of ancestral and novel defenses in a genus of toxic plants (Erysimum, Brassicaceae) |journal=eLife |volume=9 |pages=e51712 |date=April 2020 |pmid=32252891 |pmc=7180059 |doi=10.7554/eLife.51712 |doi-access=free}}

|39.5 Gb PacBio sequences (average length 10,603 bp), one lane Illumina MiSeq sequencing (2 x 250 bp paired end), Phase Genomics Hi-C scaffolding, PacBio and Illumina transcriptome sequencing

|

|

scaffold N50 16.2 Kbp

|Capparaceae

|Crop

|274.53 Mb

|21,577

|

|

|2022{{cite journal |vauthors=Wang L, Fan L, Zhao Z, Zhang Z, Jiang L, Chai M, Tian C |title=The Capparis spinosa var. herbacea genome provides the first genomic instrument for a diversity and evolution study of the Capparaceae family |journal=GigaScience |volume=11 |date=October 2022 |pmid=36310248 |pmc=9618406 |doi=10.1093/gigascience/giac106}}

|contig N50 9.36 Mb

|

scaffold N50

1Mbp

total coverage ~3x (Sanger)

92.1% unigenes mapped

235Mbp anchored (of this 161Mbp also oriented)

(Australian Pine)

|Casuarinaceae

|bonsai subject

|300 Mbp

|29,827

|

|

|2018{{cite journal |vauthors=Ye G, Zhang H, Chen B, Nie S, Liu H, Gao W, Wang H, Gao Y, Gu L |title=De novo genome assembly of the stress tolerant forest species Casuarina equisetifolia provides insight into secondary growth |journal=The Plant Journal |volume=97 |issue=4 |pages=779–794 |date=February 2019 |pmid=30427081 |doi=10.1111/tpj.14159 |doi-access=free}}

|

|Celastraceae

|Chinese medicine crop

|340.12 Mbp

|31,593

|

|

|2021{{Cite journal |vauthors=Pei T, Yan M, Kong Y, Fan H, Liu J, Cui M, Fang Y, Ge B, Yang J, Zhao Q |title=The genome of Tripterygium wilfordii and characterization of the celastrol biosynthesis pathway |journal=Gigabyte |year=2021 |volume=2021 |pages=1–30 |language=en |doi=10.46471/gigabyte.14 |pmid=36967728 |pmc=10038137 |doi-access=free}}

|Contig N50 3.09 Mbp

(African cabbage)

|Cleomaceae

|C4 leafy vegetable and medicinal plant

|740 Mb

|30,933

|

|

|2023{{cite journal |vauthors=Hoang NV, Sogbohossou EO, Xiong W, Simpson CJ, Singh P, Walden N, van den Bergh E, Becker FF, Li Z, Zhu XG, Brautigam A, Weber AP, van Haarst JC, Schijlen EG, Hendre PS, Van Deynze A, Achigan-Dako EG, Hibberd JM, Schranz ME |title=The Gynandropsis gynandra genome provides insights into whole-genome duplications and the evolution of C4 photosynthesis in Cleomaceae |journal=The Plant Cell |volume=35 |issue=5 |pages=1334–1359 |date=April 2023 |pmid=36691724 |pmc=10118270 |doi=10.1093/plcell/koad018}}

|N50 of 42 Mb

|256 Mbp

|30,964

|34

|

|Crassulaceae

|Uses for medicine and food

|344.5 Mb

|35,517

|

|

|2017{{cite journal |vauthors=Fu Y, Li L, Hao S, Guan R, Fan G, Shi C, Wan H, Chen W, Zhang H, Liu G, Wang J, Ma L, You J, Ni X, Yue Z, Xu X, Sun X, Liu X, Lee SM |title=Draft genome sequence of the Tibetan medicinal herb Rhodiola crenulata |journal=GigaScience |volume=6 |issue=6 |pages=1–5 |date=June 2017 |pmid=28475810 |pmc=5530320 |doi=10.1093/gigascience/gix033}}

|

|

coverage 108.6x

contig N50 26.38 kbp

Scaffold N50 2.38 Mbp

genome covered 83.2%

~97% ESTs mapped

|

13.5x coverage

contig N50: 18.1kbp

scaffold N50: 4.677 Mbp

WGS

|

scaffold N50 1,140kbp

total coverage ~72.2 (Sanger + Ilumina)

96.8% unigenes mapped

72.8% of the genome anchored

(Silver-seed gourd)

|Cucurbitaceae

|Seed and fruit crop

|228.8 Mbp

|27,998

|20

|National Autonomous University of Mexico

|2019,{{cite journal |vauthors=Barrera-Redondo J, Ibarra-Laclette E, Vázquez-Lobo A, Gutiérrez-Guerrero YT, Sánchez de la Vega G, Piñero D, Montes-Hernández S, Lira-Saade R, Eguiarte LE |title=The Genome of Cucurbita argyrosperma (Silver-Seed Gourd) Reveals Faster Rates of Protein-Coding Gene and Long Noncoding RNA Turnover and Neofunctionalization within Cucurbita |language=en |journal=Molecular Plant |volume=12 |issue=4 |pages=506–520 |date=April 2019 |pmid=30630074 |doi=10.1016/j.molp.2018.12.023 |doi-access=free|bibcode=2019MPlan..12..506B }} updated in 2021

|contig N50 447 kbp

scaffold N50 11.6 Mbp

total coverage: 120x Illumina (HiSeq2000 and MiSeq) + 31x PacBio RSII

(wild gourd)

|Cucurbitaceae

|Wild relative of the silver-seed gourd

|255.2 Mbp

|30,592

|20

|National Autonomous University of Mexico

|2021{{cite journal |vauthors=Barrera-Redondo J, Sánchez-de la Vega G, Aguirre-Liguori JA, Castellanos-Morales G, Gutiérrez-Guerrero YT, Aguirre-Dugua X, Aguirre-Planter E, Tenaillon MI, Lira-Saade R, Eguiarte LE |title=The domestication of Cucurbita argyrosperma as revealed by the genome of its wild relative |journal=Horticulture Research |volume=8 |issue=1 |pages=109 |date=May 2021 |pmid=33931618 |pmc=8087764 |doi=10.1038/s41438-021-00544-9 |doi-access=free|bibcode=2021HorR....8..109B }}

|contig N50 1.2 Mbp

scaffold N50 12.1 Mbp

total coverage: 213x Illumina HiSeq4000 + 75.4x PacBio Sequel

(Monk fruit)

|Cucurbitaceae

|Chinese medicine/sweetener

|456.5 Mbp

|30,565

|

|Anhui Agricultural University

|2018{{cite journal |vauthors=Xia M, Han X, He H, Yu R, Zhen G, Jia X, Cheng B, Deng XW |title=Improved de novo genome assembly and analysis of the Chinese cucurbit Siraitia grosvenorii, also known as monk fruit or luo-han-guo |journal=GigaScience |volume=7 |issue=6 |date=June 2018 |pmid=29893829 |pmc=6007378 |doi=10.1093/gigascience/giy067}}

|

|Elaeagnaceae

|used in food and cosmetics

|730 Mbp

|30,812

|

|

|2022{{cite journal |vauthors=Wu Z, Chen H, Pan Y, Feng H, Fang D, Yang J, Wang Y, Yang J, Sahu SK, Liu J, Xing Y, Wang X, Liu M, Luo X, Gao P, Li L, Liu Z, Yang H, Liu X, Xu X, Liu H, Wang E |title=Genome of Hippophae rhamnoides provides insights into a conserved molecular mechanism in actinorhizal and rhizobial symbioses |journal=The New Phytologist |volume=235 |issue=1 |pages=276–291 |date=July 2022 |pmid=35118662 |doi=10.1111/nph.18017 |bibcode=2022NewPh.235..276W |s2cid=246529299}}

|

|

|

|

|Fabaceae

|Only genus of evergreen broadleaf shrub

|889 Mb

|37,188

|

|

|2018{{cite journal |vauthors=Gao F, Wang X, Li X, Xu M, Li H, Abla M, Sun H, Wei S, Feng J, Zhou Y |title=Long-read sequencing and de novo genome assembly of Ammopiptanthus nanus, a desert shrub |journal=GigaScience |volume=7 |issue=7 |date=July 2018 |pmid=29917074 |pmc=6048559 |doi=10.1093/gigascience/giy074}}

|

|

|Fabaceae

|Wild ancestor of peanut, an oilseed and grain legume crop

|

|

|

|

|2016

|Illumina 163x coverage, contig N50 23 kbp, scaffold N50 5,343 kbp

|Fabaceae

|Wood product (heartwood) and folk medicine

|653 Mb

|30,310

|10

|Chinese Academy of Forestry

|2020{{cite journal |vauthors=Hong Z, Li J, Liu X, Lian J, Zhang N, Yang Z, Niu Y, Cui Z, Xu D |title=The chromosome-level draft genome of Dalbergia odorifera |journal=GigaScience |volume=9 |issue=8 |date=August 2020 |pmid=32808664 |pmc=7433187 |doi=10.1093/gigascience/giaa084}}

|Contig N50: 5.92Mb

Scaffold N50: 56.1 6Mb

(Apple-Ring Acacia)

|Fabaceae

|Importante in the Sahel for raising bees

|

|28,979

|

|

|2018{{Cite book |url=http://gigadb.org/dataset/101054 |title=GigaDB Dataset | chapter = Genomic data of the Apple-Ring Acacia (Faidherbia albida) |date=2018 |doi=10.5524/101054 |access-date=2019-06-19 | vauthors = Chang Y, Liu H, Liu M, Liao X, Sahu SK, Fu Y, Song B, Cheng S, Kariba R, Muthemba S, Hendre PS, Mayes S, Ho WK, Kendabie P, Wang S, Li L, Muchugi A, Jamnadass R, Lu H, Peng S, Deynze AV, Simons A, Yana-Shapiro H, Xu X, Yang H, Wang J, Liu X |publisher=GigaScience Database }}

|

|

Scaffold N50:47.8Mbp

Sanger coverage ~8x

WGS

955.1 Mbp assembled

(Hyacinth Bean)

|Fabaceae

|Crop for human consumption

|

|20,946

|

|

|2018{{Cite book |title=GigaDB Dataset |chapter=Genomic data of the Hyacinth Bean (Lablab purpureus) |doi=10.5524/101056 |year=2018 |vauthors=Chang Y, Liu H, Liu M, Liao X, Sahu SK, Fu Y, Song B, Cheng S, Kariba R, Muthemba S, Hendre PS, Mayes S, Ho WK, Kendabie P, Wang S, Li L, Muchugi A, Jamnadass R, Lu H, Peng S, Deynze AV, Simons A, Yana-Shapiro H, Xu X, Yang H, Wang J, Liu X |publisher=GigaScience Database}}

|

|Fabaceae

|Forage and Chinese medicine

|976.27 Mbp

|50,022

|

|

|2023{{cite journal | vauthors = He Q, Li Z, Liu Y, Yang H, Liu L, Ren Y, Zheng J, Xu R, Wang S, Zhan Q | title = Chromosome-scale assembly and analysis of Melilotus officinalis genome for SSR development and nodulation genes analysis | journal = The Plant Genome | volume = 16 | issue = 3 | pages = e20345 | date = September 2023 | pmid = 37259688 | doi = 10.1002/tpg2.20345 | doi-access = free }}

|

|

|Fabaceae

|Desert mimosoid legume

|691 Mbp

|55,325

|

|

|2023{{cite journal | vauthors = Sudalaimuthuasari N, Ali R, Kottackal M, Rafi M, Al Nuaimi M, Kundu B, Al-Maskari RS, Wang X, Mishra AK, Balan J, Chaluvadi SR, Al Ansari F, Bennetzen JL, Purugganan MD, Hazzouri KM, Amiri KM | title = The Genome of the Mimosoid Legume Prosopis cineraria, a Desert Tree | journal = International Journal of Molecular Sciences | volume = 23 | issue = 15 | pages = 8503 | date = July 2022 | pmid = 35955640 | pmc = 9369113 | doi = 10.3390/ijms23158503 | doi-access = free }}

|

|Fabaceae

|

|

|

|

|Nature (journal)

|2023

:{{cite journal |vauthors=Ugalde JM, Straube H |title=New genes on the block: Neofunctionalization of tandem duplicate genes with putative new functions in Arabidopsis |journal=Plant Physiology |volume=192 |issue=4 |pages=2574–2576 |date=August 2023 |pmid=37158166 |pmc=10400027 |doi=10.1093/plphys/kiad271 |publisher=Oxford University Press |s2cid=258566187}}

:

:This review cites this research.

:

:{{cite journal |vauthors=Jayakodi M, Golicz AA, Kreplak J, Fechete LI, Angra D, Bednář P, Bornhofen E, Zhang H, Boussageon R, Kaur S, Cheung K, Čížková J, Gundlach H, Hallab A, Imbert B, Keeble-Gagnère G, Koblížková A, Kobrlová L, Krejčí P, Mouritzen TW, Neumann P, Nadzieja M, Nielsen LK, Novák P, Orabi J, Padmarasu S, Robertson-Shersby-Harvie T, Robledillo LÁ, Schiemann A, Tanskanen J, Törönen P, Warsame AO, Wittenberg AH, Himmelbach A, Aubert G, Courty PE, Doležel J, Holm LU, Janss LL, Khazaei H, Macas J, Mascher M, Smýkal P, Snowdon RJ, Stein N, Stoddard FL, Stougaard J, Tayeh N, Torres AM, Usadel B, Schubert I, O'Sullivan DM, Schulman AH, Andersen SU |title=The giant diploid faba genome unlocks variation in a global protein crop |journal=Nature |volume=615 |issue=7953 |pages=652–659 |date=March 2023 |pmid=36890232 |pmc=10033403 |doi=10.1038/s41586-023-05791-5 |bibcode=2023Natur.615..652J}}

|

|Fabaceae

|Forage and cover crop

|2.03 Gbp

|

|

|

|2023{{cite journal | vauthors = Fuller T, Bickhart DM, Koch LM, Kucek LK, Ali S, Mangelson H, Monteros MJ, Hernandez T, Smith TP, Riday H, Sullivan ML | title = A reference assembly for the legume cover crop hairy vetch (Vicia villosa) | journal = GigaByte | volume = 2023 | pages = 1–20 | date = 2023-11-13 | pmid = 38023065 | pmc = 10659084 | doi = 10.46471/gigabyte.98 | doi-access = free }}

|

|Fabaceae

|Wild legume

|474.1 Mbp

|

|

|

|2023{{Cite book | title = GigaDB Dataset | chapter = Supporting data for "Genomic data of Vigna hirtella" |date=2023 |url=http://dx.doi.org/10.5524/102399 |language=en |doi=10.5524/102399 | vauthors = Pootakham W, Sonthirod C, Naktang C, Yundaeng C, Yoocha T, Kongkachana W, Sangsrakru D, Somta P, Tangphatsornruang S | publisher = GigaScience Database }}

|

|Fabaceae

|Tetraploid wild legume

|998.7 Mbp

|

|

|

|2023{{cite journal | vauthors = Pootakham W, Sonthirod C, Naktang C, Yundaeng C, Yoocha T, Kongkachana W, Sangsrakru D, Somta P, Tangphatsornruang S | title = Genome assemblies of Vigna reflexo-pilosa (créole bean) and its progenitors, Vigna hirtella and Vigna trinervia, revealed homoeolog expression bias and expression-level dominance in the allotetraploid | journal = GigaScience | volume = 12 | date = December 2022 | pmid = 37470496 | pmc = 10357499 | doi = 10.1093/gigascience/giad050 }}{{Cite book |title=GigaDB Dataset | chapter = Supporting data for "Genomic data of créole bean, Vigna reflexopilosa" |date=2023 |language=en |doi=10.5524/102398 | vauthors = Pootakham W, Sonthirod C, Naktang C, Yundaeng C, Yoocha T, Kongkachana W, Sangsrakru D, Somta P, Tangphatsornruang |publisher=GigaScience Database}}

|

(Bambara Groundnut)

|Fabaceae

|similar to peanuts

|

|31,707

|

|

|2018{{Cite book | chapter-url=http://gigadb.org/dataset/101055 | title = GigaDB Dataset | chapter = Genomic data of the Bambara Groundnut (Vigna subterranea) |date=2018 |doi=10.5524/101055 |access-date=2019-06-19 | vauthors = Chang Y, Liu H, Liu M, Liao X, Sahu SK, Fu Y, Song B, Cheng S, Kariba R, Muthemba S, Hendre PS, Mayes S, Ho WK, Kendabie P, Wang S, Li L, Muchugi A, Jamnadass R, Lu H, Peng S, Deynze AV, Simons A, Yana-Shapiro H, Xu X, Yang H, Wang J, Liu X | publisher = GigaScience Database }}

|

|Fabaceae

|

|498,7 Mbp

|

|

|

|2023

|

|Fabaceae

|often used to relieve symptoms of menopause, high cholesterol, and osteoporosis.{{cite book |vauthors=Nieves JW |chapter=Alternative Therapy through Nutrients and Nutraceuticals |title=Osteoporosis |date=2013 |pages=1739–1749 |doi=10.1016/B978-0-12-415853-5.00074-1 |isbn=9780124158535 |quote=Red clover is a wild plant belonging to the legume family and is often used to relieve symptoms of menopause, high cholesterol, and osteoporosis.}}

|

|

|

|

|2022{{Cite journal |vauthors=Bickhart DM, Koch LM, Smith TP, Riday H, Sullivan ML |date=2022-02-18 |title=Chromosome-scale assembly of the highly heterozygous genome of red clover (Trifolium pratense L.), an allogamous forage crop species |journal=Gigabyte |language=en |volume=2022 |pages=1–13 |doi=10.46471/gigabyte.42 |pmid=36824517 |pmc=9650271 |s2cid=246987248 |doi-access=free}}

|

|Fabaceae

|grain to livestock

|

|

|

|

|2022{{Cite journal |vauthors=Xi H, Nguyen V, Ward C, Liu Z, Searle IR |date=2022-01-31 |title=Chromosome-level assembly of the common vetch (Vicia sativa) reference genome |journal=Gigabyte |language=en |volume=2022 |pages=1–20 |doi=10.46471/gigabyte.38 |pmid=36824524 |pmc=9650280 |s2cid=246453086 |doi-access=free}}

|

|Fabaceae

|horsefeed

|

|

|

|

|2021{{Cite journal |vauthors=Shirasawa K, Chahota R, Hirakawa H, Nagano S, Nagasaki H, Sharma T, Isobe S |date=2021-10-08 |title=A chromosome-scale draft genome sequence of horsegram (Macrotyloma uniflorum) |journal=Gigabyte |language=en |volume=2021 |pages=1–23 |doi=10.46471/gigabyte.30 |pmid=36824333 |pmc=9650294 |doi-access=free}}

|

|Fagaceae

|cultivated nut

|785.53 Mb

|36,479

|

|Beijing University of Agriculture

|2019{{cite journal |vauthors=Xing Y, Liu Y, Zhang Q, Nie X, Sun Y, Zhang Z, Li H, Fang K, Wang G, Huang H, Bisseling T, Cao Q, Qin L |title=Hybrid de novo genome assembly of Chinese chestnut (Castanea mollissima) |journal=GigaScience |volume=8 |issue=9 |date=September 2019 |pmid=31513707 |pmc=6741814 |doi=10.1093/gigascience/giz112 |url=}}

|Illumina: ~42.7×

PacBio: ~87×

contig N50: 944,000bp

|Fagaceae

|Pedunculate oak,

large diversity,

somatic mutation studies

|736 Mb

|25,808

|12

|[https://www6.bordeaux-aquitaine.inrae.fr/biogeco Biogeco lab, Inrae, University of Bordeaux]

|2018{{cite journal |vauthors=Plomion C, Aury JM, Amselem J, Leroy T, Murat F, Duplessis S, Faye S, Francillonne N, Labadie K, Le Provost G, Lesur I, Bartholomé J, Faivre-Rampant P, Kohler A, Leplé JC, Chantret N, Chen J, Diévart A, Alaeitabar T, Barbe V, Belser C, Bergès H, Bodénès C, Bogeat-Triboulot MB, Bouffaud ML, Brachi B, Chancerel E, Cohen D, Couloux A, Da Silva C, Dossat C, Ehrenmann F, Gaspin C, Grima-Pettenati J, Guichoux E, Hecker A, Herrmann S, Hugueney P, Hummel I, Klopp C, Lalanne C, Lascoux M, Lasserre E, Lemainque A, Desprez-Loustau ML, Luyten I, Madoui MA, Mangenot S, Marchal C, Maumus F, Mercier J, Michotey C, Panaud O, Picault N, Rouhier N, Rué O, Rustenholz C, Salin F, Soler M, Tarkka M, Velt A, Zanne AE, Martin F, Wincker P, Quesneville H, Kremer A, Salse J |title=Oak genome reveals facets of long lifespan |journal=Nature Plants |volume=4 |issue=7 |date=July 2018 |pages=440–452 |pmid=29915331 |pmc=6086335 |doi=10.1038/s41477-018-0172-3 |bibcode=2018NatPl...4..440P |url=}}

|https://www.oakgenome.fr/?page_id=587

Pecan

|Junglandaceae

|snacks in various recipes

|651.31 Mb

|

|

|

|2019{{cite journal |vauthors=Huang Y, Xiao L, Zhang Z, Zhang R, Wang Z, Huang C, Huang R, Luan Y, Fan T, Wang J, Shen C, Zhang S, Wang X, Randall J, Zheng B, Wu J, Zhang Q, Xia G, Xu C, Chen M, Zhang L, Jiang W, Gao L, Chen Z, Leslie CA, Grauke LJ, Huang J |title=The genomes of pecan and Chinese hickory provide insights into Carya evolution and nut nutrition |journal=GigaScience |volume=8 |issue=5 |date=May 2019 |pmid=31049561 |pmc=6497033 |doi=10.1093/gigascience/giz036}}

|

|Junglandaceae

|cultivated nut

|548.7 Mb

|

|

|

|2022{{cite journal |vauthors=Li X, Cai K, Zhang Q, Pei X, Chen S, Jiang L, Han Z, Zhao M, Li Y, Zhang X, Li Y, Zhang S, Chen S, Qu G, Tigabu M, Chiang VL, Sederoff R, Zhao X |title=The Manchurian Walnut Genome: Insights into Juglone and Lipid Biosynthesis |journal=GigaScience |volume=11 |date=June 2022 |pmid=35764602 |pmc=9239856 |doi=10.1093/gigascience/giac057}}

|

|Junglandaceae

|cultivated nut

|540 Mb

|

|

|Chinese Academy of Forestry

|2020{{cite journal |vauthors=Zhang J, Zhang W, Ji F, Qiu J, Song X, Bu D, Pan G, Ma Q, Chen J, Huang R, Chang Y, Pei D |title=A high-quality walnut genome assembly reveals extensive gene expression divergences after whole-genome duplication |journal=Plant Biotechnology Journal |date=January 2020 |volume=18 |issue=9 |pages=1848–1850 |pmid=32004401 |doi=10.1111/pbi.13350 |pmc=7415773 |doi-access=free}}

|

|Junglandaceae

|cultivated nut

|536.50 Mb

|

|

|Nanjing Forestry University

|2020{{cite journal |vauthors=Ning DL, Wu T, Xiao LJ, Ma T, Fang WL, Dong RQ, Cao FL |title=Chromosomal-level assembly of Juglans sigillata genome using Nanopore, BioNano, and Hi-C analysis |journal=GigaScience |volume=9 |issue=2 |date=February 2020 |pmid=32101299 |pmc=7043058 |doi=10.1093/gigascience/giaa006}}

|Illumina+Nanopore+bionano

scaffold N50: 16.43 Mb, contig N50: 4.34 Mb

|

(red silk cotton tree)

|Malvaceae

|capsules with white fibre like cotton

|895 Mb

|

|

|

|2018{{cite journal |vauthors=Gao Y, Wang H, Liu C, Chu H, Dai D, Song S, Yu L, Han L, Fu Y, Tian B, Tang L |title=De novo genome assembly of the red silk cotton tree (Bombax ceiba) |journal=GigaScience |volume=7 |issue=5 |date=May 2018 |pmid=29757382 |pmc=5967522 |doi=10.1093/gigascience/giy051}}

|

|Malvaceae

|domestication history of cacao

|

|

|

|

|2018{{cite journal |vauthors=Cornejo OE, Yee MC, Dominguez V, Andrews M, Sockell A, Strandberg E, Livingstone D, Stack C, Romero A, Umaharan P, Royaert S, Tawari NR, Ng P, Gutierrez O, Phillips W, Mockaitis K, Bustamante CD, Motamayor JC |title=Theobroma cacao L., provide insights into its domestication process |journal=Communications Biology |volume=1 |issue=1 |pages=167 |date=2018-10-16 |pmid=30345393 |pmc=6191438 |doi=10.1038/s42003-018-0168-6}}

|

|Malvaceae

|Cacao family tropical fruit

|423 Mbp

|31,381

|

|

|2024{{Cite journal |last1=Alves |first1=Rafael Moysés |last2=de Abreu |first2=Vinicius A C |last3=Oliveira |first3=Rafaely Pantoja |last4=Almeida |first4=João Victor dos Anjos |last5=de Oliveira |first5=Mauro de Medeiros |last6=Silva |first6=Saura R |last7=Paschoal |first7=Alexandre R |last8=de Almeida |first8=Sintia S |last9=de Souza |first9=Pedro A F |last10=Ferro |first10=Jesus A |last11=Miranda |first11=Vitor F O |last12=Figueira |first12=Antonio |last13=Domingues |first13=Douglas S |last14=Varani |first14=Alessandro M |date=2024-01-01 |title=Genomic decoding of Theobroma grandiflorum (cupuassu) at chromosomal scale: evolutionary insights for horticultural innovation |journal=GigaScience |volume=13 |pages=giae027 |doi=10.1093/gigascience/giae027 |issn=2047-217X |pmc=11152179 |pmid=38837946}}

|

|

|Moraceae

|Extremely endangered fruit tree

|769.44 Mbp

|39,596

|28

|

|2022{{cite journal |vauthors=He J, Bao S, Deng J, Li Q, Ma S, Liu Y, Cui Y, Zhu Y, Wei X, Ding X, Ke K, Chen C |title=A chromosome-level genome assembly of Artocarpus nanchuanensis (Moraceae), an extremely endangered fruit tree |journal=GigaScience |volume=11 |date=June 2022 |pmid=35701376 |pmc=9197682 |doi=10.1093/gigascience/giac042}}

|

(Horseradish Tree)

|Moringaceae

|traditional herbal medicine

|

|18,451

|

|

|2018{{Cite book |title=GigaDB Dataset |chapter=Genomic data of the Horseradish Tree (Moringa oleifera) |doi=10.5524/101058 |year=2018 |vauthors=Chang Y, Liu H, Liu M, Liao X, Sahu SK, Fu Y, Song B, Cheng S, Kariba R, Muthemba S, Hendre PS, Mayes S, Ho WK, Kendabie P, Wang S, Li L, Muchugi A, Jamnadass R, Lu H, Peng S, Deynze AV, Simons A, Yana-Shapiro H, Xu X, Yang H, Wang J, Liu X |publisher=GigaScience Database}}

|

|Myrtaceae

|

|589.32 Mb

|

|

|

|2024{{cite journal | vauthors = Ferguson S, Jones A, Murray K, Andrew R, Schwessinger B, Borevitz J | title = Plant genome evolution in the genus Eucalyptus is driven by structural rearrangements that promote sequence divergence | journal = Genome Research | volume = 34 | issue = 4 | pages = 606–619 | date = May 2024 | pmid = 38589251 | pmc = 11146599 | doi = 10.1101/gr.277999.123 }}

|

|Myrtaceae

|Fibre and timber crop

|544.5 Mb

|

|

|

|2023{{cite journal | vauthors = Lötter A, Duong TA, Candotti J, Mizrachi E, Wegrzyn JL, Myburg AA | title = Haplogenome assembly reveals structural variation in Eucalyptus interspecific hybrids | journal = GigaScience | volume = 12 | date = December 2022 | pmid = 37632754 | pmc = 10460159 | doi = 10.1093/gigascience/giad064 }}

|

|

|

|Myrtaceae

|

|633.52 Mb

|

|

|

|2024

|

|Myrtaceae

|

|512.89 Mb

|

|

|

|2024

|

|Myrtaceae

|Fibre and timber crop

|594.87 Mb

|

|

|ANU

|2020{{cite journal |vauthors=Wang W, Das A, Kainer D, Schalamun M, Morales-Suarez A, Schwessinger B, Lanfear R |title=The draft nuclear genome assembly of Eucalyptus pauciflora: a pipeline for comparing de novo assemblies |journal=GigaScience |volume=9 |issue=1 |date=January 2020 |pmid=31895413 |pmc=6939829 |doi=10.1093/gigascience/giz160}}

|Nanopore + Illumina; contig N50: 3.23 Mb

|

|Oxalidales

|fruit crop

|335.49 Mb

|

|

|

|2020{{cite journal | vauthors = Wu S, Sun W, Xu Z, Zhai J, Li X, Li C, Zhang D, Wu X, Shen L, Chen J, Ren H, Dai X, Dai Z, Zhao Y, Chen L, Cao M, Xie X, Liu X, Peng D, Dong J, Hsiao YY, Chen SL, Tsai WC, Lan S, Liu ZJ | title = The genome sequence of star fruit (Averrhoa carambola) | journal = Horticulture Research | volume = 7 | issue = 1 | pages = 95 | date = 2020-06-01 | pmid = 32528707 | pmc = 7261771 | doi = 10.1038/s41438-020-0307-3 | bibcode = 2020HorR....7...95W }}

|

|Rosaceae

|fruit crop

|706.43 Mb

|

|

|

|2019

|

|Rosaceae

|Fruit tree

|760.1 Mb

|45,743

|

|Shanghai Academy of Agricultural Sciences

|2020{{cite journal |vauthors=Jiang S, An H, Xu F, Zhang X |title=Chromosome-level genome assembly and annotation of the loquat (Eriobotrya japonica) genome |journal=GigaScience |volume=9 |issue=3 |date=March 2020 |pmid=32141509 |pmc=7059265 |doi=10.1093/gigascience/giaa015}}

|Illumina+Nanopore+Hi-C

17 chromosomes, scaffold N50: 39.7 Mb

|

454/Illumina/solid

39x coverage

WGS

|

|

scaffold N50 1,542.7 (kbp??)

total coverage ~16.9x (Sanger + 454)

71.2% anchored

|

WGS

ca 99% ESTs mapped

215.9 Mbp in pseudomolecules

|Rosaceae

|Fruit crop

|284.2 Mbp

|24,448

|8

|

|2020{{cite journal |vauthors=Liu C, Feng C, Peng W, Hao J, Wang J, Pan J, He Y |title=Chromosome-level draft genome of a diploid plum (Prunus salicina) |journal=GigaScience |volume=9 |issue=12 |date=December 2020 |pmid=33300949 |pmc=7727024 |doi=10.1093/gigascience/giaa130}}

|PacBio/Hi-C, with contig N50 of 1.78 Mb and scaffold N50 of 32.32 Mb.

|Rosaceae

|Fruit crop

|504 Mbp

|

|

|

|2023{{cite journal | vauthors = Zong D, Liu H, Gan P, Ma S, Liang H, Yu J, Li P, Jiang T, Sahu SK, Yang Q, Zhang D, Li L, Qiu X, Shao W, Yang J, Li Y, Guang X, He C | title = Chromosomal-scale genomes of two Rosa species provide insights into genome evolution and ascorbate accumulation | journal = The Plant Journal | volume = 117 | issue = 4 | pages = 1264–1280 | date = February 2024 | pmid = 37964640 | doi = 10.1111/tpj.16543 | s2cid = 265210737 }}

|

|Rosaceae

|Fruit crop

|981.2 Mb

|

|

|

|2023{{cite journal | vauthors = Zong D, Liu H, Gan P, Ma S, Liang H, Yu J, Li P, Jiang T, Sahu SK, Yang Q, Zhang D, Li L, Qiu X, Shao W, Yang J, Li Y, Guang X, He C | title = Chromosomal-scale genomes of two Rosa species provide insights into genome evolution and ascorbate accumulation | journal = The Plant Journal | volume = 117 | issue = 4 | pages = 1264–1280 | date = February 2024 | pmid = 37964640 | doi = 10.1111/tpj.16543 | s2cid = 265210737 }}

|

(Black raspberry)

|Rosaceae

|Fruit crop

|290 Mbp

|

|

|

|2018{{cite journal |vauthors=VanBuren R, Wai CM, Colle M, Wang J, Sullivan S, Bushakra JM, Liachko I, Vining KJ, Dossett M, Finn CE, Jibran R, Chagné D, Childs K, Edger PP, Mockler TC, Bassil NV |title=A near complete, chromosome-scale assembly of the black raspberry (Rubus occidentalis) genome |journal=GigaScience |volume=7 |issue=8 |date=August 2018 |pmid=30107523 |pmc=6131213 |doi=10.1093/gigascience/giy094}}

|

|Rutaceae

|Fruit crop

|

|

|

|

|2021{{cite journal |vauthors=Fan Y, Sahu SK, Yang T, Mu W, Wei J, Cheng L, Yang J, Liu J, Zhao Y, Lisby M, Liu H |title=The Clausena lansium (Wampee) genome reveal new insights into the carbazole alkaloids biosynthesis pathway |journal=Genomics |volume=113 |issue=6 |pages=3696–3704 |date=November 2021 |pmid=34520805 |doi=10.1016/j.ygeno.2021.09.007 |s2cid=237515315 |doi-access=free}}

|

|

Contig N50:552.8 Kbp [phytozome]

WGS

>=95 % cDNA found

(desert tree)

|Salicaceae

|farming and ranching

|479.3 Mbp

|35,131

|

|

|2017{{cite journal |vauthors=Yang W, Wang K, Zhang J, Ma J, Liu J, Ma T |title=The draft genome sequence of a desert tree Populus pruinosa |journal=GigaScience |volume=6 |issue=9 |pages=1–7 |date=September 2017 |pmid=28938721 |pmc=5603765 |doi=10.1093/gigascience/gix075}}

|

|Sapindaceae

|Tree producing nervonic acid

|633.28 Mb

|28,438

|

|

|2020{{cite journal |vauthors=Ma Q, Sun T, Li S, Wen J, Zhu L, Yin T, Yan K, Xu X, Li S, Mao J, Wang YN, Jin S, Zhao X, Li Q |title=The Acer truncatum genome provides insights into the nervonic acid biosynthesis |journal=The Plant Journal |date=August 2020 |volume=104 |issue=3 |pages=662–678 |pmid=32772482 |doi=10.1111/tpj.14954 |pmc=7702125 |doi-access=free}}

|contig N50 = 773.17 Kb; scaffold N50 = 46.36 Mb

|Sapindaceae

|Plant species with extremely small populations

|110 Gb

|28,320

|13

|

|2019{{cite journal |vauthors=Yang J, Wariss HM, Tao L, Zhang R, Yun Q, Hollingsworth P, Dao Z, Luo G, Guo H, Ma Y, Sun W |title=De novo genome assembly of the endangered Acer yangbiense, a plant species with extremely small populations endemic to Yunnan Province, China |journal=GigaScience |volume=8 |issue=7 |date=July 2019 |pmid=31307060 |pmc=6629541 |doi=10.1093/gigascience/giz085}}

|scaffold N50 = 45 Mb

|Sapindaceae

|Fruit crop

|471.88 Mb

|

|

|

|2017{{cite journal |vauthors=Lin Y, Min J, Lai R, Wu Z, Chen Y, Yu L, Cheng C, Jin Y, Tian Q, Liu Q, Liu W, Zhang C, Lin L, Zhang D, Thu M, Zhang Z, Liu S, Zhong C, Fang X, Wang J, Yang H, Varshney RK, Yin Y, Lai Z |title=Genome-wide sequencing of longan (Dimocarpus longan Lour.) provides insights into molecular basis of its polyphenol-rich characteristics |journal=GigaScience |volume=6 |issue=5 |pages=1–14 |date=May 2017 |pmid=28368449 |pmc=5467034 |doi=10.1093/gigascience/gix023}}

|

|Sapindaceae

|Fruit Crop

|504.2 Mb

|24,672

|

|

|2019{{cite journal |vauthors=Bi Q, Zhao Y, Du W, Lu Y, Gui L, Zheng Z, Yu H, Cui Y, Liu Z, Cui T, Cui D, Liu X, Li Y, Fan S, Hu X, Fu G, Ding J, Ruan C, Wang L |title=Pseudomolecule-level assembly of the Chinese oil tree yellowhorn (Xanthoceras sorbifolium) genome |journal=GigaScience |volume=8 |issue=6 |date=June 2019 |pmid=31241154 |pmc=6593361 |doi=10.1093/gigascience/giz070}}{{cite journal |vauthors=Liang Q, Li H, Li S, Yuan F, Sun J, Duan Q, Li Q, Zhang R, Sang YL, Wang N, Hou X, Yang KQ, Liu JN, Yang L |title=The genome assembly and annotation of yellowhorn (Xanthoceras sorbifolium Bunge) |journal=GigaScience |volume=8 |issue=6 |date=June 2019 |pmid=31241155 |pmc=6593362 |doi=10.1093/gigascience/giz071}}

|

|Thymelaeaceae

|Fragrant wood

|726.5 Mb

|29,203

|

|

|2020{{cite journal |vauthors=Ding X, Mei W, Lin Q, Wang H, Wang J, Peng S, Li H, Zhu J, Li W, Wang P, Chen H, Dong W, Guo D, Cai C, Huang S, Cui P, Dai H |title=Genome sequence of the agarwood tree Aquilaria sinensis (Lour.) Spreng: the first chromosome-level draft genome in the Thymelaeceae family |journal=GigaScience |volume=9 |issue=3 |date=March 2020 |pmid=32118265 |pmc=7050300 |doi=10.1093/gigascience/giaa013}}

|Illumina+nanopore+Hi-C, scaffold N50: 88.78 Mb

! Organism strain !! Family !! Relevance !!Genome size !! Number of genes predicted !! Organization !! Year of completion !! Assembly status

|Apocynaceae

|Exudes milky latex

|420 Mbp

|14,474

|Oregon State University

|2019{{cite journal |vauthors=Weitemier K, Straub SC, Fishbein M, Bailey CD, Cronn RC, Liston A |title=A draft genome and transcriptome of common milkweed (Asclepias syriaca) as resources for evolutionary, ecological, and molecular studies in milkweeds and Apocynaceae |journal=PeerJ |volume=7 |pages=e7649 |date=2019-09-20 |pmid=31579586 |pmc=6756140 |doi=10.7717/peerj.7649 |doi-access=free}}

|80.4× depth

N50 = 3,415 bp

|Asteraceae

|Chinese medicine

|

|37,505

|

|2017{{cite journal |vauthors=Yang J, Zhang G, Zhang J, Liu H, Chen W, Wang X, Li Y, Dong Y, Yang S |title=Hybrid de novo genome assembly of the Chinese herbal fleabane Erigeron breviscapus |journal=GigaScience |volume=6 |issue=6 |pages=1–7 |date=June 2017 |pmid=28431028 |pmc=5449645 |doi=10.1093/gigascience/gix028}}

|

(Pink Ipê)

|Bignoniaceae

|Common tree

|503.7 Mb

|31,668

|

|2017{{cite journal |vauthors=Silva-Junior OB, Grattapaglia D, Novaes E, Collevatti RG |title=Genome assembly of the Pink Ipê (Handroanthus impetiginosus, Bignoniaceae), a highly valued, ecologically keystone Neotropical timber forest tree |journal=GigaScience |volume=7 |issue=1 |pages=1–16 |date=January 2018 |pmid=29253216 |pmc=5905499 |doi=10.1093/gigascience/gix125}}

|

|Ebenaceae

|Fruit tree

|849.53 Mb

|28,580

|Zhejiang University & Chinese Academy of Forestry

|2019{{cite journal |vauthors=Zhu QG, Xu Y, Yang Y, Guan CF, Zhang QY, Huang JW, Grierson D, Chen KS, Gong BC, Yin XR |title=Diospyros oleifera Cheng) genome provides new insights into the inheritance of astringency and ancestral evolution |journal=Horticulture Research |volume=6 |issue=1 |pages=138 |date=2019-12-18 |pmid=31871686 |doi=10.1038/s41438-019-0227-2 |doi-access=free |pmc=6917749}} & 2020{{cite journal |vauthors=Suo Y, Sun P, Cheng H, Han W, Diao S, Li H, Mai Y, Zhao X, Li F, Fu J |title=A high-quality chromosomal genome assembly of Diospyros oleifera Cheng |journal=GigaScience |volume=9 |issue=1 |date=January 2020 |pmid=31944244 |pmc=6964648 |doi=10.1093/gigascience/giz164}}

|Two genomes both chromosome scale & assigned to 15 pseudochromosomes

(Chinese red sage)

|Lamiaceae

|TCM treatment for COPD

|641 Mb

|34,598

|

|2015{{cite journal |vauthors=Zhang G, Tian Y, Zhang J, Shu L, Yang S, Wang W, Sheng J, Dong Y, Chen W |title=Hybrid de novo genome assembly of the Chinese herbal plant danshen (Salvia miltiorrhiza Bunge) |journal=GigaScience |volume=4 |issue=1 |pages=62 |date=2015-12-01 |pmid=26673920 |pmc=4678694 |doi=10.1186/s13742-015-0104-3 |doi-access=free}}

|

|Lamiaceae

|Ornamental shrub and insect-repellent

|506 Mb

|32,164

|Michigan State University

|2020{{cite journal |vauthors=Hamilton JP, Godden GT, Lanier E, Bhat WW, Kinser TJ, Vaillancourt B, Wang H, Wood JC, Jiang J, Soltis PS, Soltis DE, Hamberger B, Buell CR |title=Generation of a chromosome-scale genome assembly of the insect-repellent terpenoid-producing Lamiaceae species, Callicarpa americana |journal=GigaScience |volume=9 |issue=9 |date=September 2020 |pmid=32893861 |doi=10.1093/gigascience/giaa093 |pmc=7476102 |doi-access=free}}

|17 pseudomolecules Contig N50: 7.5Mb Scaffold N50: and 29.0 Mb

|Lamiaceae

|Oil crop

|353 Mb

|35,597

|Oregon State University

|2017{{cite journal |vauthors=Vining KJ, Johnson SR, Ahkami A, Lange I, Parrish AN, Trapp SC, Croteau RB, Straub SC, Pandelova I, Lange BM |title=Draft Genome Sequence of Mentha longifolia and Development of Resources for Mint Cultivar Improvement |language=en |journal=Molecular Plant |volume=10 |issue=2 |pages=323–339 |date=February 2017 |pmid=27867107 |doi=10.1016/j.molp.2016.10.018 |doi-access=free|bibcode=2017MPlan..10..323V }}

|

(Teak)

|Lamiaceae

|Durability and water resistance

|

|31,168

|

|2019{{cite journal |vauthors=Zhao D, Hamilton JP, Bhat WW, Johnson SR, Godden GT, Kinser TJ, Boachon B, Dudareva N, Soltis DE, Soltis PS, Hamberger B, Buell CR |title=A chromosomal-scale genome assembly of Tectona grandis reveals the importance of tandem gene duplication and enables discovery of genes in natural product biosynthetic pathways |journal=GigaScience |volume=8 |issue=3 |date=March 2019 |pmid=30698701 |pmc=6394206 |doi=10.1093/gigascience/giz005}}

|

(Chinese happy tree)

|Nyssaceae

|chemical drugs for cancer treatment

|403 Mb

|31,825

|

|2017{{cite journal |vauthors=Zhao D, Hamilton JP, Pham GM, Crisovan E, Wiegert-Rininger K, Vaillancourt B, DellaPenna D, Buell CR |title=De novo genome assembly of Camptotheca acuminata, a natural source of the anti-cancer compound camptothecin |journal=GigaScience |volume=6 |issue=9 |pages=1–7 |date=September 2017 |pmid=28922823 |pmc=5737489 |doi=10.1093/gigascience/gix065}}

|

|Nyssaceae

|Living fossil

|1,169 Mb

|42,554

|

|2020{{cite journal |vauthors=Chen Y, Ma T, Zhang L, Kang M, Zhang Z, Zheng Z, Sun P, Shrestha N, Liu J, Yang Y |title=Genomic analyses of a "living fossil": The endangered dove-tree |journal=Molecular Ecology Resources |date=January 2020 |volume=20 |issue=3 |pages=756–769 |pmid=31970919 |doi=10.1111/1755-0998.13138 |s2cid=210865226}}

|

Contig N50 = 45.5 Kbp

|Primulaceae

|Used for cooking

|474 Mb

|

|

|2018{{cite journal |vauthors=Cocker JM, Wright J, Li J, Swarbreck D, Dyer S, Caccamo M, Gilmartin PM |title=Primula vulgaris (primrose) genome assembly, annotation and gene expression, with comparative genomics on the heterostyly supergene |journal=Scientific Reports |volume=8 |issue=1 |pages=17942 |date=December 2018 |pmid=30560928 |pmc=6299000 |doi=10.1038/s41598-018-36304-4 |bibcode=2018NatSR...817942C}}

|

|Rubiaceae

|Anti-malarial

|1.1 Gb

|

|

|2022{{Cite journal |vauthors=Canales NA, Pérez-Escobar OA, Powell RF, Töpel M, Kidner C, Nesbitt M, Maldonado C, Barnes CJ, Rønsted N, Przelomska NA, Leitch IJ, Antonelli A |date=2022-10-06 |title=A highly contiguous, scaffold-level nuclear genome assembly for the fever tree (Cinchona pubescens Vahl) as a novel resource for Rubiaceae research |journal=Gigabyte |language=en |volume=2022 |pages=1–16 |doi=10.46471/gigabyte.71 |pmid=36950143 |pmc=10027117 |s2cid=252810685 |doi-access=free}}

|

Pseudomolecules spanning 91 scaffolds (760Mbp of which 594Mbp have been oriented )

over 98% ESTs mappable

scaffold N50: 516,100bp

contig N50: 25,200 bp

~109× coverage

contig N50: 5100bp

~40x coverage

79.2x coverage

contig N50: 31,429bp

scaffold N50: 1,318,511bp

105x coverage

contig N50: 6,506bp

scaffold N50: 44,298bp

(field dodder)

|Solanaceae

|model system for parasitic plants

|556 Mbp kmer (581 Mbp)

|44,303

|RWTH Aachen University, Research Center Jülich, University of Tromsø, Helmholtz Zentrum München, Technical University Munich, University of Vienna

|2018{{cite journal |vauthors=Vogel A, Schwacke R, Denton AK, Usadel B, Hollmann J, Fischer K, Bolger A, Schmidt MH, Bolger ME, Gundlach H, Mayer KF, Weiss-Schneeweiss H, Temsch EM, Krause K |title=Footprints of parasitism in the genome of the parasitic flowering plant Cuscuta campestris |journal=Nature Communications |volume=9 |issue=1 |pages=2515 |date=June 2018 |pmid=29955043 |pmc=6023873 |doi=10.1038/s41467-018-04344-z |bibcode=2018NatCo...9.2515V}}

|scaffold N50 = 1.38 Mbp

|Solanaceae

|model system for parasitic plants

|265 Mbp

kmer (273 Mbp)

|19,671

|Kunming Institute of Botany, Chinese Academy of Sciences

|2018{{cite journal |vauthors=Sun G, Xu Y, Liu H, Sun T, Zhang J, Hettenhausen C, Shen G, Qi J, Qin Y, Li J, Wang L, Chang W, Guo Z, Baldwin IT, Wu J |title=Large-scale gene losses underlie the genome evolution of parasitic plant Cuscuta australis |journal=Nature Communications |volume=9 |issue=1 |pages=2683 |date=July 2018 |pmid=29992948 |pmc=6041341 |doi=10.1038/s41467-018-04721-8 |bibcode=2018NatCo...9.2683S}}

|scaffold N50 = 5.95 Mbp

contig N50 = 3.63 Mbp

63x coverage

contig N50: 16,480bp

scaffold N50:89,778bp

>93% unigenes found

scaffold N50: 79.7 kbp

194kbp superscaffolds using physical Nicotiana map

scaffold N50: 82.6 kb

166kbp superscaffolds using physical Nicotiana map

(a) cv. CM334 (b) cv. Zunla-1

(b) 35,336

(b) 2014{{cite journal |vauthors=Qin C, Yu C, Shen Y, Fang X, Chen L, Min J, Cheng J, Zhao S, Xu M, Luo Y, Yang Y, Wu Z, Mao L, Wu H, Ling-Hu C, Zhou H, Lin H, González-Morales S, Trejo-Saavedra DL, Tian H, Tang X, Zhao M, Huang Z, Zhou A, Yao X, Cui J, Li W, Chen Z, Feng Y, Niu Y, Bi S, Yang X, Li W, Cai H, Luo X, Montes-Hernández S, Leyva-González MA, Xiong Z, He X, Bai L, Tan S, Tang X, Liu D, Liu J, Zhang S, Chen M, Zhang L, Zhang L, Zhang Y, Liao W, Zhang Y, Wang M, Lv X, Wen B, Liu H, Luan H, Zhang Y, Yang S, Wang X, Xu J, Li X, Li S, Wang J, Palloix A, Bosland PW, Li Y, Krogh A, Rivera-Bustamante RF, Herrera-Estrella L, Yin Y, Yu J, Hu K, Zhang Z |title=Whole-genome sequencing of cultivated and wild peppers provides insights into Capsicum domestication and specialization |journal=Proceedings of the National Academy of Sciences of the United States of America |volume=111 |issue=14 |pages=5135–40 |date=April 2014 |pmid=24591624 |pmc=3986200 |doi=10.1073/pnas.1400975111 |bibcode=2014PNAS..111.5135Q |doi-access=free}}

N50 scaffold: (a) 2.47 Mb (b) 1.23 Mb

N50 scaffold: 0.45 Mb

|Poaceae

|Crop & used in medicine & ornamentation

|1,619 Mb

|39,629

|

|2019{{cite journal |vauthors=Guo C, Wang Y, Yang A, He J, Xiao C, Lv S, Han F, Yuan Y, Yuan Y, Dong X, Guo J, Yang Y, Liu H, Zuo N, Hu Y, Zhao K, Jiang Z, Wang X, Jiang T, Shen Y, Cao M, Wang Y, Long Z, Rong T, Huang L, Zhou S |title=The Coix Genome Provides Insights into Panicoideae Evolution and Papery Hull Domestication |journal=Molecular Plant |volume=13 |issue=2 |pages=309–320 |date=February 2020 |pmid=31778843 |doi=10.1016/j.molp.2019.11.008 |doi-access=free|bibcode=2020MPlan..13..309G }}

|

|Poaceae

|African orphan crop

|761 Mb

|

|ICRISAT, UC Davis

|2021{{cite journal |vauthors=Wang X, Chen S, Ma X, Yssel AE, Chaluvadi SR, Johnson MS, Gangashetty P, Hamidou F, Sanogo MD, Zwaenepoel A, Wallace J, Van de Peer Y, Bennetzen JL, Van Deynze A |title=Genome sequence and genetic diversity analysis of an under-domesticated orphan crop, white fonio (Digitaria exilis) |journal=GigaScience |volume=10 |issue=3 |date=March 2021 |pmid=33710327 |pmc=7953496 |doi=10.1093/gigascience/giab013}}

|3,329 contigs. N50: 1.73 Mb; L50, 126)

|Poaceae

| Forage & erosion control

|602 Mb

|56,469

|

|2019{{cite journal |vauthors=Carballo J, Santos BA, Zappacosta D, Garbus I, Selva JP, Gallo CA, Díaz A, Albertini E, Caccamo M, Echenique V |title=A high-quality genome of Eragrostis curvula grass provides insights into Poaceae evolution and supports new strategies to enhance forage quality |journal=Scientific Reports |volume=9 |issue=1 |pages=10250 |date=July 2019 |pmid=31308395 |pmc=6629639 |doi=10.1038/s41598-019-46610-0 |bibcode=2019NatSR...910250C}}

|

100x coverage

|

| 2002{{cite journal |vauthors=Yu J, Hu S, Wang J, Wong GK, Li S, Liu B, Deng Y, Dai L, Zhou Y, Zhang X, Cao M, Liu J, Sun J, Tang J, Chen Y, Huang X, Lin W, Ye C, Tong W, Cong L, Geng J, Han Y, Li L, Li W, Hu G, Huang X, Li W, Li J, Liu Z, Li L, Liu J, Qi Q, Liu J, Li L, Li T, Wang X, Lu H, Wu T, Zhu M, Ni P, Han H, Dong W, Ren X, Feng X, Cui P, Li X, Wang H, Xu X, Zhai W, Xu Z, Zhang J, He S, Zhang J, Xu J, Zhang K, Zheng X, Dong J, Zeng W, Tao L, Ye J, Tan J, Ren X, Chen X, He J, Liu D, Tian W, Tian C, Xia H, Bao Q, Li G, Gao H, Cao T, Wang J, Zhao W, Li P, Chen W, Wang X, Zhang Y, Hu J, Wang J, Liu S, Yang J, Zhang G, Xiong Y, Li Z, Mao L, Zhou C, Zhu Z, Chen R, Hao B, Zheng W, Chen S, Guo W, Li G, Liu S, Tao M, Wang J, Zhu L, Yuan L, Yang H |title=A draft sequence of the rice genome (Oryza sativa L. ssp. indica) |journal=Science |volume=296 |issue=5565 |pages=79–92 |date=April 2002 |pmid=11935017 |doi=10.1126/science.1068037 |bibcode=2002Sci...296...79Y |s2cid=208529258}}

|

| 2002{{cite journal |vauthors=Goff SA, Ricke D, Lan TH, Presting G, Wang R, Dunn M, Glazebrook J, Sessions A, Oeller P, Varma H, Hadley D, Hutchison D, Martin C, Katagiri F, Lange BM, Moughamer T, Xia Y, Budworth P, Zhong J, Miguel T, Paszkowski U, Zhang S, Colbert M, Sun WL, Chen L, Cooper B, Park S, Wood TC, Mao L, Quail P, Wing R, Dean R, Yu Y, Zharkikh A, Shen R, Sahasrabudhe S, Thomas A, Cannings R, Gutin A, Pruss D, Reid J, Tavtigian S, Mitchell J, Eldredge G, Scholl T, Miller RM, Bhatnagar S, Adey N, Rubano T, Tusneem N, Robinson R, Feldhaus J, Macalma T, Oliphant A, Briggs S |s2cid=2960202 |title=A draft sequence of the rice genome (Oryza sativa L. ssp. japonica) |journal=Science |volume=296 |issue=5565 |pages=92–100 |date=April 2002 |pmid=11935018 |doi=10.1126/science.1068275 |bibcode=2002Sci...296...92G}}

|Poaceae

|weed

|3,560 Mb

|76,420

|USDA ARS, Forage and Range Research

|2023{{cite journal | vauthors = Robbins MD, Bushman BS, Huff DR, Benson CW, Warnke SE, Maughan CA, Jellen EN, Johnson PG, Maughan PJ | title = Chromosome-Scale Genome Assembly and Annotation of Allotetraploid Annual Bluegrass (Poa annua L.) | journal = Genome Biology and Evolution | volume = 15 | issue = 1 | date = January 2023 | pmid = 36574983 | pmc = 9838796 | doi = 10.1093/gbe/evac180 }}

|unphased (haploid) pseudomolecules

|Poaceae

|diploid progenitor to Poa annua

|2,250 Mb

|39,420

|Penn State University

|2023{{cite journal | vauthors = Benson CW, Sheltra MR, Maughan PJ, Jellen EN, Robbins MD, Bushman BS, Patterson EL, Hall ND, Huff DR | title = Homoeologous evolution of the allotetraploid genome of Poa annua L | journal = BMC Genomics | volume = 24 | issue = 1 | pages = 350 | date = June 2023 | pmid = 37365554 | pmc = 10291818 | doi = 10.1186/s12864-023-09456-5 | doi-access = free }}

|unphased (haploid) pseudomolecules

|Poaceae

|Lawn grass

|6,090 Mb

|

|

|2023{{cite journal |vauthors=Phillips AR, Seetharam AS, Albert PS, AuBuchon-Elder T, Birchler JA, Buckler ES, Gillespie LJ, Hufford MB, Llaca V, Romay MC, Soreng RJ, Kellogg EA, Ross-Ibarra J |title=A happy accident: a novel turfgrass reference genome |journal=G3 |volume=13 |issue=6 |date=June 2023 |pmid=37002915 |pmc=10234399 |doi=10.1093/g3journal/jkad073}}

|Scaffold N50: 65.1 Mbp

|Poaceae

|diploid progenitor to Poa annua

|1,270 Mb

|37,935

|Penn State University

|2023

|unphased (haploid) pseudomolecules

|603.3 Mb

|25,225

|

|

scaffold N50: 62.4Mbp

Sanger, 8.5x coverage

WGS

Illumina WGS

scaffold N50: 76kbp

Sanger, 4-6x coverage per BAC

|Bromeliaceae

|Wild pineapple relative

|382 Mb

|27,024

|25

|

|2015{{cite journal |vauthors=Ming R, VanBuren R, Wai CM, Tang H, Schatz MC, Bowers JE, Lyons E, Wang ML, Chen J, Biggers E, Zhang J, Huang L, Zhang L, Miao W, Zhang J, Ye Z, Miao C, Lin Z, Wang H, Zhou H, Yim WC, Priest HD, Zheng C, Woodhouse M, Edger PP, Guyot R, Guo HB, Guo H, Zheng G, Singh R, Sharma A, Min X, Zheng Y, Lee H, Gurtowski J, Sedlazeck FJ, Harkess A, McKain MR, Liao Z, Fang J, Liu J, Zhang X, Zhang Q, Hu W, Qin Y, Wang K, Chen LY, Shirley N, Lin YR, Liu LY, Hernandez AG, Wright CL, Bulone V, Tuskan GA, Heath K, Zee F, Moore PH, Sunkar R, Leebens-Mack JH, Mockler T, Bennetzen JL, Freeling M, Sankoff D, Paterson AH, Zhu X, Yang X, Smith JA, Cushman JC, Paull RE, Yu Q |title=The pineapple genome and the evolution of CAM photosynthesis |journal=Nature Genetics |volume=47 |issue=12 |pages=1435–42 |date=December 2015 |pmid=26523774 |pmc=4867222 |doi=10.1038/ng.3435}}

|100× coverage using Illumina paired-end reads of libraries with different insert sizes.

|Bromeliaceae

|The most economically valuable crop possessing crassulacean acid metabolism (CAM)

|382 Mb

|27,024

|25

|

|2015

|400× Illumina reads, 2× Moleculo synthetic long reads, 1× 454 reads, 5× PacBio single-molecule long reads and 9,400 BACs.

|Hydrocharitaceae

|Aquatic plant

|6450 Mb

|

|

|

|2024{{cite journal | vauthors = Wang ZF, Wu LF, Chen L, Zhu WG, Yu EP, Xu FX, Cao HL | title = Genome assembly of Ottelia alismoides, a multiple-carbon utilisation aquatic plant | journal = BMC Genomic Data | volume = 25 | issue = 1 | pages = 48 | date = May 2024 | pmid = 38783174 | pmc = 11118731 | doi = 10.1186/s12863-024-01230-0 | doi-access = free }}

|11,923 scaffolds/contigs and an N50 of 790,733 bp

|Pontederiaceae

|Aquatic plant

|1220 Mb

|

|8

|65,299

|2024{{cite journal | vauthors = Huang Y, Guo L, Xie L, Shang N, Wu D, Ye C, Rudell EC, Okada K, Zhu QH, Song BK, Cai D, Junior AM, Bai L, Fan L | title = A reference genome of Commelinales provides insights into the commelinids evolution and global spread of water hyacinth (Pontederia crassipes) | journal = GigaScience | volume = 13 | date = January 2024 | pmid = 38486346 | pmc = 10938897 | doi = 10.1093/gigascience/giae006 }}

|Scaffold N50 = 77.2Mb

|

N50 scaffold: 1.3 Mb

|

|CATAS, BGI, CIRAD

|Musaceae

|Ornamental, aids understanding Musaceae genomes evolution

|567 Mb

|39,112

|9

|

|2023{{cite journal | vauthors = Wang ZF, Rouard M, Droc G, Heslop-Harrison PJ, Ge XJ | title = Genome assembly of Musa beccarii shows extensive chromosomal rearrangements and genome expansion during evolution of Musaceae genomes | journal = GigaScience | volume = 12 | date = December 2022 | pmid = 36807539 | pmc = 9941839 | doi = 10.1093/gigascience/giad005 }}

|

|Arecaceae

|native to tropical and subtropical regions

|1980 Mb

|51,235

|

|

|2018{{cite journal |vauthors=Zhao H, Wang S, Wang J, Chen C, Hao S, Chen L, Fei B, Han K, Li R, Shi C, Sun H, Wang S, Xu H, Yang K, Xu X, Shan X, Shi J, Feng A, Fan G, Liu X, Zhao S, Zhang C, Gao Q, Gao Z, Jiang Z |title=The chromosome-level genome assemblies of two rattans (Calamus simplicifolius and Daemonorops jenkinsiana) |journal=GigaScience |volume=7 |issue=9 |date=September 2018 |pmid=30101322 |pmc=6117794 |doi=10.1093/gigascience/giy097}}

|

|Arecaceae

|used in food and cosmetics

|2420 Mb (approx)

|

|

|

|2017{{cite journal |vauthors=Xiao Y, Xu P, Fan H, Baudouin L, Xia W, Bocs S, Xu J, Li Q, Guo A, Zhou L, Li J, Wu Y, Ma Z, Armero A, Issali AE, Liu N, Peng M, Yang Y |title=The genome draft of coconut (Cocos nucifera) |journal=GigaScience |volume=6 |issue=11 |pages=1–11 |date=November 2017 |pmid=29048487 |pmc=5714197 |doi=10.1093/gigascience/gix095}}

|

|Arecaceae

|native to tropical and subtropical regions.

|1610 Mb

|52,342

|

|

|2018

|

|

|

|

|Orchidaceae

|Commercialised hybrid orchid

|678 Mbp

|

|

|

|2022{{Cite journal |vauthors=Sherpa R, Devadas R, Suprasanna P, Bolbhat SN, Nikam TD |date=2022-08-09 |title=First De novo whole genome sequencing and assembly of mutant Dendrobium hybrid cultivar 'Emma White' |journal=Gigabyte |language=en |volume=2022 |pages=1–8 |doi=10.46471/gigabyte.66 |pmid=36824506 |pmc=9694038 |doi-access=free}}

|

Plant with crassulacean acid metabolism (CAM).

|

|Iridaceae

|Ornamental and, commercial interest in secondary metabolites

|10040 Mb

|63,944

|

|Novartis

|2023{{Cite journal |vauthors=Bruccoleri RE, Oakeley EJ, Faust AM, Altorfer M, Dessus-Babus S, Burckhardt D, Oertli M, Naumann U, Petersen F, Wong J |date=2023-10-05 |title=Genome assembly of the bearded iris, Iris pallida Lam. |url=https://gigabytejournal.com/articles/94 |journal=Gigabyte |language=en |volume=2023 |pages=1–10 |doi=10.46471/gigabyte.94 |pmid=37829656 |pmc=10565908 |issn=2709-4715}}

|Scaffold N50: 14.34 Mbp

|Iridaceae

|Ornamental flower

| 226.6 Mb

|

|

|

|2023{{cite journal |vauthors=Chin KJ, Pirro S |title=The Complete Genome Sequences of Iris sibirica and Iris virginica (Iridaceae, Asparagales) |journal=Biodiversity Genomes |volume=2023 |date=2023-03-05 |pmid=36936674 |pmc=10019338 |doi=10.56179/001c.72791}}

|

|Iridaceae

|Ornamental flower

| 390.9 Mb

|

|

|

|2023

|