User:C6541/molecules
[http://en.wikipedia.org/w/index.php?title=User_talk:C6541/molecules&action=edit§ion=new I would appreciate a comment or concern by clicking here!]
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| style="text-align: left;" | Molecule Images |
|---|
| 3D Image
!Article/Name !2D Image !Article/Name |
| 256px
|Dextrorphan 3D Molecule |Mexacarbate 2D Molecule |
| 256px
|Noscapine 3D Molecule |Triclofos 2D Molecule |
| 256px
|Papaverine 3D Molecule |Cyclohexylacetone 2D Molecule |
| 256px
|Ethylphenidate 3D Molecule |2C-TFM Molecule |
| 256px
|Apomorphine 3D Molecule |2C-B Molecule |
| 256px
|1,3-Butanediol 3D Molecule |4-Methylephedrine 2D Molecule (mephedrone metabolite) |
| |Codeine 3D Molecule
|Prenylamine 2D Molecule |
| 256px
|Lidocaine 3D Molecule |2CBCB-NBOMe 2D Molecule |
| 256px
|4-Methyl-aminorex 3D Molecule |2C-C-NBOMe 2D Molecule |
| 256px
|2C-T-2 3D Molecule |2CBFly-NBOMe 2D Molecule |
| 256px
|LSA 3D Molecule |2C-TFM-NBOMe 2D Molecule |
| 256px
|Levomethamphetamine 3D Molecule |25I-NBMD 2D Molecule |
| 256px
|Propylhexedrine 3D Molecule |25I-NBF 2D Molecule |
| 256px
|Lisdexamfetamine 3D Molecule |TFMFly 2D Molecule |
| 256px
|Bromantane 3D Molecule |DSP-4 2D Molecule |
| 256px
|Noscapine 3D Molecule |Vilazodone 2D Molecule |
| 256px
|MDPV 3D Molecule |Norpropylhexedrine 2D Molecule |
| 256px
|Benzphetamine 3D Molecule |
| 256px
|Binospirone 3D Molecule |
| 256px
|Oxymetazoline 3D Molecule |
| 256px
|Desoxypipradrol 3D Molecule |
| 256px
|4-MMC 3D Molecule |
| 256px
|Cyclobenzaprine 3D Molecule |
| 256px
|JWH-018 3D Molecule |
| 256px
|Dihydromorphine 3D Molecule (ball and sticks) | | |
| 256px
|Thebaine 3D Molecule (ball and sticks) | | |
| 256px
|4-Methyl-AET 3D Molecule (ball and sticks) | | |
| 256px
|ALD-52 3D Molecule (ball and sticks) | | |
| 256px
|2C-C-NBOMe 3D Molecule (ball and sticks) | | |
| 256px
|Phenibut 3D Molecule (ball and sticks) | | |
| 256px
|Methoxetamine 3D Molecule (ball and sticks) | | |
| 256px
|Norpropylhexedrine 3D Molecule | | |
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| style="text-align: left;" | How I make them |
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| Process for creating the 3D molecules is as follows: |
| 1. Create 3D molecule in Ghemical running on Linux based on chemical 2D skeleton |
| 2. Use auto-tool to properly arrange the molecule |
| 3. Check molecular weight and empirical formula with Ghemical to ensure proper creation |
| 4. Using OpenBabel export in to a PDB (Protein Data Bank) file |
| 5. Save the project and close Ghemical |
| 6. Using QuteMol running through WINE open the PDB file and animate it |
| 7. Save the GIF file |
| 8. Upload the GIF animated molecule to Wikipedia Commmons and edit the drug article to display it. |
| Process for creating the 2D molecules is as follows: |
| 1. Set BKChem settings following WikiProject Chemistry's structure drawing guidelines |
| 2. Draw molecule in BKChem |
| 3. Export molecule as SVG |