C-type lectin

{{Pfam box

| Symbol = Lectin_C

| Name = Lectin C-type domain

| image = PDB 1jzn EBI.jpg

| width =

| caption = Pentameric structure of rattlesnake venom lectin which is a galactose binding lectin.{{cite journal |vauthors=Walker JR, Nagar B, Young NM, Hirama T, Rini JM |title=X-ray crystal structure of a galactose-specific C-type lectin possessing a novel decameric quaternary structure |journal=Biochemistry |volume=43 |issue=13 |pages=3783–92 |date=April 2004 |pmid=15049685 |doi=10.1021/bi035871a }}{{cite journal | vauthors = Mahla RS, Reddy MC, Prasad DV, Kumar H | title = Sweeten PAMPs: Role of Sugar Complexed PAMPs in Innate Immunity and Vaccine Biology | journal = Frontiers in Immunology | volume = 4 | pages = 248 | date = September 2013 | pmid = 24032031 | pmc = 3759294 | doi = 10.3389/fimmu.2013.00248 | doi-access = free }}

| Pfam= PF00059

| InterPro= IPR001304

| SMART= CLECT

| Prosite = PS50041

| SCOP = 2msb

| TCDB =

| OPM family=

| OPM protein=

| CDD = cd00037

| PDB=

| Membranome family =

}}

A C-type lectin (CLEC) is a type of carbohydrate-binding protein known as a lectin.{{cite journal |vauthors=Zelensky AN, Gready JE |title=The C-type lectin-like domain superfamily |journal=FEBS J. |volume=272 |issue=24 |pages=6179–217 |date=December 2005 |pmid=16336259 |doi=10.1111/j.1742-4658.2005.05031.x |s2cid=7084402 }} The C-type designation is from their requirement for calcium for binding.{{MeshName|C-Type+Lectin}} Proteins that contain C-type lectin domains have a diverse range of functions including cell-cell adhesion, immune response to pathogens and apoptosis.{{cite journal |author=Drickamer K |title=C-type lectin-like domains |journal=Curr. Opin. Struct. Biol. |volume=9 |issue=5 |pages=585–90 |date=October 1999 |pmid=10508765 |doi= 10.1016/S0959-440X(99)00009-3}}{{cite journal |vauthors=Cambi A, Figdor C |title=Necrosis: C-type lectins sense cell death |journal=Curr. Biol. |volume=19 |issue=9 |pages=R375–8 |date=May 2009 |pmid=19439262 |doi=10.1016/j.cub.2009.03.032 |s2cid=17409821 |doi-access=free |bibcode=2009CBio...19.R375C }}

Classification

Drickamer et al. classified C-type lectins into 7 subgroups (I to VII) based on the order of the various protein domains in each protein.{{cite journal |author=Drickamer K |title=Evolution of Ca(2+)-dependent animal lectins |journal=Prog. Nucleic Acid Res. Mol. Biol. |volume=45 |pages=207–32 |year=1993 |pmid=8341801 |doi= 10.1016/S0079-6603(08)60870-3|series=Progress in Nucleic Acid Research and Molecular Biology |isbn=978-0-12-540045-9|doi-access=free }} This classification was subsequently updated in 2002, leading to seven additional groups (VIII to XIV).{{cite journal |vauthors=Drickamer K, Fadden AJ |title=Genomic analysis of C-type lectins |journal=Biochem. Soc. Symp. |volume= 69|issue=69 |pages=59–72 |year=2002 |pmid=12655774 |doi= 10.1042/bss0690059}} Most recently, three further subgroups were added (XV to XVII).

class="wikitable"
GroupNameAssociated domains
ILecticansEGF, Sushi, Ig and Link domains
IIAsialoglycoprotein and DC receptorsNone
IIICollectinsNone
IVSelectinsSushi and EGF domains
VNK - cell receptorsNone
VIMulti-CTLD endocytic receptorsFnII and Ricin domains
VIIReg groupNone
VIIIChondrolectin, LayilinNone
IXTetranectinNone
XPolycystinWSC, REJ, PKD domains
XIAttractin (ATRN)PSI, EGF and CUB domains
XIIEosinophil major basic protein (EMBP)None
XIIIDGCR2None
XIVThrombomodulin, CD93, CD248, CLEC14AEGF domains {{cite journal |title=C-type lectin domain group 14 proteins in vascular biology, cancer and inflammation. |journal=FEBS Journal |year=2019 |pmid=31287944|last1=Khan |first1=K. A. |last2=McMurray |first2=J. L. |last3=Mohammed |first3=F. |last4=Bicknell |first4=R. |volume=286 |issue=17 |pages=3299–3332 |doi=10.1111/febs.14985 |pmc=6852297 }}
XVBimlecNone
XVISEECSCP and EGF domains
XVIICBCP/Frem1/QBRICKCSPG repeats and CalX-beta domains

CLECs include:

The "NK Cell lectin-like receptors" are a very closely related group:{{MeshName|NK+Cell+Lectin-Like+Receptors}}

Additional proteins containing this domain include:

References

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